Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq14667 86.0 4e-15
seq9938 82.4 5e-14
seq6604 77.0 2e-12
>seq14667
Length=1487825
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 357137 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 357194
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 357195 TAAT-CAACGCGAGCT 357209
>seq9938
Length=3524
Score = 82.4 bits (90), Expect = 5e-14
Identities = 66/76 (87%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| |||| |||||| |||||||||||||||||||
Sbjct 2000 CTCACTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTGTACAAAGGGCAGGGACT 2057
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 2058 TAAT-CAACGCGAGCT 2072
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| |||| |||||| |||||||||||||||||||
Sbjct 1597 CTCACTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTGTACAAAGGGCAGGGACT 1654
Query 109 TAATACAACGCAAG 122
|||| |||||| ||
Sbjct 1655 TAAT-CAACGCGAG 1667
>seq6604
Length=1756
Score = 77.0 bits (84), Expect = 2e-12
Identities = 55/61 (90%), Gaps = 2/61 (3%)
Strand=Plus/Minus
Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123
|| ||||||||| ||||||||||| ||||||||||||||||||| |||| |||||| |||
Sbjct 1013 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAACGCGAGC 956
Query 124 T 124
|
Sbjct 955 T 955
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300558376760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |