Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq14667 86.0 4e-15 seq9938 82.4 5e-14 seq6604 77.0 2e-12 >seq14667 Length=1487825 Score = 86.0 bits (94), Expect = 4e-15 Identities = 67/76 (88%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| ||||||||||| ||||||||||||||||||| Sbjct 357137 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 357194 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 357195 TAAT-CAACGCGAGCT 357209 >seq9938 Length=3524 Score = 82.4 bits (90), Expect = 5e-14 Identities = 66/76 (87%), Gaps = 3/76 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| |||| |||||| ||||||||||||||||||| Sbjct 2000 CTCACTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTGTACAAAGGGCAGGGACT 2057 Query 109 TAATACAACGCAAGCT 124 |||| |||||| |||| Sbjct 2058 TAAT-CAACGCGAGCT 2072 Score = 78.8 bits (86), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| |||| |||||| ||||||||||||||||||| Sbjct 1597 CTCACTAAACCATC-CAATCGGTAGTA-GCGATGGGCGGTGTGTACAAAGGGCAGGGACT 1654 Query 109 TAATACAACGCAAG 122 |||| |||||| || Sbjct 1655 TAAT-CAACGCGAG 1667 >seq6604 Length=1756 Score = 77.0 bits (84), Expect = 2e-12 Identities = 55/61 (90%), Gaps = 2/61 (3%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGC 123 || ||||||||| ||||||||||| ||||||||||||||||||| |||| |||||| ||| Sbjct 1013 CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAACGCGAGC 956 Query 124 T 124 | Sbjct 955 T 955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300558376760