Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq17633 109 6e-22 seq21339 104 2e-20 seq19344 75.2 1e-11 >seq17633 Length=921127 Score = 109 bits (120), Expect = 6e-22 Identities = 133/179 (74%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG----CCTTTGC--TCGAATACATTAC 66 ||||||||||||||||||||| |||||||||||| || | || |||||| | Sbjct 63167 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACCGCAG 63108 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 | |||||||| ||||||||| | |||||||||||||| ||||||| | ||| | | Sbjct 63107 CTAGGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCA 63049 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| || | |||| | |||||| | ||||| | | |||||||||||||||| Sbjct 63048 TGATTAAGAGGGATGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 62990 >seq21339 Length=814 Score = 104 bits (114), Expect = 2e-20 Identities = 132/179 (74%), Gaps = 7/179 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG----CCTTTGC--TCGAATACATTAC 66 ||||||||||||||||||||| |||||||||||| || | || |||||| | Sbjct 511 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACCGCAG 452 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 | |||||||| ||||||||| | |||||||||||||| ||||||| | ||| | | Sbjct 451 CTAGGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCA 393 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 392 TGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 334 >seq19344 Length=1152264 Score = 75.2 bits (82), Expect = 1e-11 Identities = 114/160 (71%), Gaps = 7/160 (4%) Strand=Plus/Minus Query 32 AGCGTTCAAAGCAGGCCT----TTGCT--CGAATACATTACCATGGAATAATAGAATAGG 85 || |||||||||||||| | || ||||||| | | |||||||| ||||||| Sbjct 804104 AGTGTTCAAAGCAGGCCGCCCGTCGCCGCCGAATACCGCAGCTAGGAATAATGGAATAGG 804045 Query 86 ACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGTCG 145 || | |||||||||||||| ||||||| | ||| | ||||| || | ||| | || Sbjct 804044 AC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGACGGCCG 803986 Query 146 GGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| | ||||| | | |||||||||||||||| Sbjct 803985 GGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 803946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511575017280