Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq8864 176 9e-42
seq14667 168 1e-39
seq6604 154 3e-35
seq9938 100 5e-19
seq14749 86.0 1e-14
seq6866 78.8 2e-12
>seq8864
Length=2357
Score = 176 bits (194), Expect = 9e-42
Identities = 196/258 (76%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| | | ||| | ||| ||||||||||||||||
Sbjct 2049 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACGCAAGATGGAG-CAATAACAGGTCTGTG 2106
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||| ||| || | || || || ||
Sbjct 2107 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGGGCGGATCAGCGTGTGTCTCC 2166
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| |||| ||| |||||| | | || | | ||||| | |||| | | ||||
Sbjct 2167 CCTGCGCCGAGAGGCGCGGGTAACCCGCTGAACCCCGCTCGTGATCGGGACTGGGGATTG 2226
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|| |||| | | |||||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 2227 AAACTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 2286
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 2287 AAGTCCCTGCCCTTTGTA 2304
>seq14667
Length=1487825
Score = 168 bits (186), Expect = 1e-39
Identities = 201/261 (77%), Gaps = 9/261 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| | | || | ||| ||||||||||||||||
Sbjct 357433 CTTCTTAGAGGGACAAGTGGCATTCAGCC-ACGCGAGATGGAG-CAATAACAGGTCTGTG 357376
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189
|||||||||||||| | |||| |||||||||| ||| || | || || || || |
Sbjct 357375 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGGGCGGATCAGCGTGTGTCTAC 357316
Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCGTGCTGGGGA-TAGAGCA 247
|| | |||| ||| |||||| || | | ||| | | ||||| | |||| | ||| |
Sbjct 357315 AC-TGCGCCGAGAGGCACGGGTAA-CTCGCTGAACCCCGCTCGTGATCGGGACTGGAG-A 357259
Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307
||| || |||| | | |||||||||||| || |||||||||| ||||| ||| |||||||
Sbjct 357258 TTGAAACTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTG 357199
Query 308 ATTACGTCCCTGCCCTTTGTA 328
|||| ||||||||||||||||
Sbjct 357198 ATTAAGTCCCTGCCCTTTGTA 357178
>seq6604
Length=1756
Score = 154 bits (170), Expect = 3e-35
Identities = 192/258 (74%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | || | | | ||| | ||| ||||||||||||||||
Sbjct 733 CTTCTTAGAGGGACAAGTGGCGTTCAGTC-ACGCAAGATGGAG-CAATAACAGGTCTGTG 790
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| |||||||||| ||| || | || || || | |
Sbjct 791 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGGGCGGATCAGCGTGTCTACC- 849
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| || | ||| |||||| | | || | | ||||| | |||| | | ||||
Sbjct 850 -CTGCGCTGAGAGGCGCGGGTAACCCGCTGAACCCCGCTCGTGATCGGGACTGGGGATTG 908
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|| ||| | | |||||||||||| || |||||||||| ||||| ||| ||||||||||
Sbjct 909 AAACAATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 968
Query 311 ACGTCCCTGCCCTTTGTA 328
| ||||||||||||||||
Sbjct 969 AAGTCCCTGCCCTTTGTA 986
>seq9938
Length=3524
Score = 100 bits (110), Expect = 5e-19
Identities = 82/100 (82%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288
||||| | |||| | | |||| || ||| | | |||||||||||| || |||||||||
Sbjct 2140 TCGTGATCGGGACTGGGGATTGAAACAATTTCCCATCAACGAGGAATTCCCAGTAAGCGC 2081
Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
| ||||| ||| ||||||||||| ||||||||||||||||
Sbjct 2080 GGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 2041
Score = 87.8 bits (96), Expect = 3e-15
Identities = 81/99 (82%), Gaps = 3/99 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| | | || | ||| ||||||||||||||||
Sbjct 2343 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACGCGAGATGGAG-CAATAACAGGTCTGTG 2286
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169
|||||||||||||| | |||| |||||||||| ||| ||
Sbjct 2285 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATG 2247
>seq14749
Length=77162
Score = 86.0 bits (94), Expect = 1e-14
Identities = 86/108 (80%), Gaps = 3/108 (3%)
Strand=Plus/Minus
Query 63 GGTCGCCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAAC 121
||||| | |||||||||||||| | || | |||| | | || | ||| |||||||
Sbjct 1613 GGTCGGCAACTTCTTAGAGGGACAAGTAGCGTTCAGCC-ACGCGAGATGGAG-CAATAAC 1556
Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169
||||||||||||||||||||||| | |||| |||||||||| ||| ||
Sbjct 1555 AGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATG 1508
>seq6866
Length=2368
Score = 78.8 bits (86), Expect = 2e-12
Identities = 51/56 (91%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169
||||||||||||||||||||||||||||||| | |||| |||||||||| ||| ||
Sbjct 2245 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCAACAATG 2300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946388420096
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |