Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq8864 176 9e-42 seq14667 168 1e-39 seq6604 154 3e-35 seq9938 100 5e-19 seq14749 86.0 1e-14 seq6866 78.8 2e-12 >seq8864 Length=2357 Score = 176 bits (194), Expect = 9e-42 Identities = 196/258 (76%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | | ||| | ||| |||||||||||||||| Sbjct 2049 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACGCAAGATGGAG-CAATAACAGGTCTGTG 2106 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||| || | || || || || Sbjct 2107 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGGGCGGATCAGCGTGTGTCTCC 2166 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| |||| ||| |||||| | | || | | ||||| | |||| | | |||| Sbjct 2167 CCTGCGCCGAGAGGCGCGGGTAACCCGCTGAACCCCGCTCGTGATCGGGACTGGGGATTG 2226 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 || |||| | | |||||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 2227 AAACTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 2286 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 2287 AAGTCCCTGCCCTTTGTA 2304 >seq14667 Length=1487825 Score = 168 bits (186), Expect = 1e-39 Identities = 201/261 (77%), Gaps = 9/261 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | | || | ||| |||||||||||||||| Sbjct 357433 CTTCTTAGAGGGACAAGTGGCATTCAGCC-ACGCGAGATGGAG-CAATAACAGGTCTGTG 357376 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT-TCATC 189 |||||||||||||| | |||| |||||||||| ||| || | || || || || | Sbjct 357375 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGGGCGGATCAGCGTGTGTCTAC 357316 Query 190 ACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTG-TCGTGCTGGGGA-TAGAGCA 247 || | |||| ||| |||||| || | | ||| | | ||||| | |||| | ||| | Sbjct 357315 AC-TGCGCCGAGAGGCACGGGTAA-CTCGCTGAACCCCGCTCGTGATCGGGACTGGAG-A 357259 Query 248 TTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTG 307 ||| || |||| | | |||||||||||| || |||||||||| ||||| ||| ||||||| Sbjct 357258 TTGAAACTATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTG 357199 Query 308 ATTACGTCCCTGCCCTTTGTA 328 |||| |||||||||||||||| Sbjct 357198 ATTAAGTCCCTGCCCTTTGTA 357178 >seq6604 Length=1756 Score = 154 bits (170), Expect = 3e-35 Identities = 192/258 (74%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | || | | | ||| | ||| |||||||||||||||| Sbjct 733 CTTCTTAGAGGGACAAGTGGCGTTCAGTC-ACGCAAGATGGAG-CAATAACAGGTCTGTG 790 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| |||||||||| ||| || | || || || | | Sbjct 791 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATGGGCGGATCAGCGTGTCTACC- 849 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 || || | ||| |||||| | | || | | ||||| | |||| | | |||| Sbjct 850 -CTGCGCTGAGAGGCGCGGGTAACCCGCTGAACCCCGCTCGTGATCGGGACTGGGGATTG 908 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 || ||| | | |||||||||||| || |||||||||| ||||| ||| |||||||||| Sbjct 909 AAACAATTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCATAAGCTCGCGTTGATT 968 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 969 AAGTCCCTGCCCTTTGTA 986 >seq9938 Length=3524 Score = 100 bits (110), Expect = 5e-19 Identities = 82/100 (82%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 229 TCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGC 288 ||||| | |||| | | |||| || ||| | | |||||||||||| || ||||||||| Sbjct 2140 TCGTGATCGGGACTGGGGATTGAAACAATTTCCCATCAACGAGGAATTCCCAGTAAGCGC 2081 Query 289 GTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||| ||| ||||||||||| |||||||||||||||| Sbjct 2080 GGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTTGTA 2041 Score = 87.8 bits (96), Expect = 3e-15 Identities = 81/99 (82%), Gaps = 3/99 (3%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| | | || | ||| |||||||||||||||| Sbjct 2343 CTTCTTAGAGGGACAAGTGGCGTTCAGCC-ACGCGAGATGGAG-CAATAACAGGTCTGTG 2286 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 |||||||||||||| | |||| |||||||||| ||| || Sbjct 2285 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATG 2247 >seq14749 Length=77162 Score = 86.0 bits (94), Expect = 1e-14 Identities = 86/108 (80%), Gaps = 3/108 (3%) Strand=Plus/Minus Query 63 GGTCGCCGGCTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAAC 121 ||||| | |||||||||||||| | || | |||| | | || | ||| ||||||| Sbjct 1613 GGTCGGCAACTTCTTAGAGGGACAAGTAGCGTTCAGCC-ACGCGAGATGGAG-CAATAAC 1556 Query 122 AGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 ||||||||||||||||||||||| | |||| |||||||||| ||| || Sbjct 1555 AGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCCACAATG 1508 >seq6866 Length=2368 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 ||||||||||||||||||||||||||||||| | |||| |||||||||| ||| || Sbjct 2245 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCAACAATG 2300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946388420096