Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4387 468 2e-129 seq14590 367 4e-99 seq3375 318 2e-84 seq20664 109 2e-21 seq20594 98.7 3e-18 seq80041 78.8 3e-12 seq30 78.8 3e-12 >seq4387 Length=3233148 Score = 468 bits (518), Expect = 2e-129 Identities = 282/297 (95%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||||| |||| ||| |||||| | | |||||||||||||||||| Sbjct 1175523 CTCCCACTTATTCTACACCCCTCATGTCTCTTCACAGTGCCAGACTAGAGTCAAGCTCAA 1175582 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1175583 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 1175642 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1175643 ATAGCAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 1175702 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1175703 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 1175762 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1175763 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 1175819 Score = 105 bits (116), Expect = 2e-20 Identities = 87/106 (82%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | |||||||||||||| |||| Sbjct 1176056 CTTCTGCTCCGCGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGAGTTACC 1175997 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGT 112 |||| |||| ||| ||||||||| ||||||||||||||| || ||| Sbjct 1175996 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGT 1175951 >seq14590 Length=5833377 Score = 367 bits (406), Expect = 4e-99 Identities = 223/236 (94%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 2339246 AGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCCGTTCTCTTGGCTGTGGTTTCGCTAGA 2339305 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 | | || |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2339306 TCGCAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGA 2339365 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct 2339366 CGAGGCATTTGGCTACCGATAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCAT 2339425 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2339426 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 2339481 Score = 203 bits (224), Expect = 1e-49 Identities = 126/135 (93%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 2339882 AGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCCGTTCTCTTGGCTGTGGTTTCGCTAGA 2339941 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 | | || |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2339942 TCGCAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGA 2340001 Query 418 CGAGGCATTTGGCTA 432 | |||||||||||| Sbjct 2340002 CAGGGCATTTGGCTA 2340016 >seq3375 Length=89888 Score = 318 bits (352), Expect = 2e-84 Identities = 347/458 (76%), Gaps = 32/458 (7%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 72065 CTTCTGCTCCGCGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACC 72124 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||| |||| ||| ||||||||| ||||||||||||||| || |||| | | | || Sbjct 72125 GTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCACTGTCCCCGGGGCAGGTC 72184 Query 127 G-GCCCGCGAA-------GGACC-------TTAACGCCAGAA---AATGGTCGGTGAAGA 168 | ||||| || || || | || |||||| || | || | | Sbjct 72185 GCGCCCGGGACCGCAGTGGGCCCCGGGGTTTGGACTCCAGAAGCGAAAGCCCGCCGGGGG 72244 Query 169 CCAGT-TCC--GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--- 222 | | ||| || ||| ||||| | |||| ||||| ||||||||||||||| Sbjct 72245 CTCGCCTCCCTGCCTCACCCGGTAAGTGAGGAAACAATAAGAGTAGTGGTATTTCACCGG 72304 Query 223 TTGCGCCGAAACGG--------CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAA 274 | ||||| ||| ||||||||||||||| ||| |||| ||| |||||| Sbjct 72305 TGGCGCCCGTTCGGGATGGGGCCTCCCACTTATTCTAAACCCCTCATGTCTCTTCACAGT 72364 Query 275 GTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTT 334 | | ||||||||||| ||||||||||||||||||||||| ||||||| |||||||| ||| Sbjct 72365 GCCAGACTAGAGTCATGCTCAACAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCCTGTT 72424 Query 335 CCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATT 394 ||||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||| Sbjct 72425 CCCTTGGATGTGGTTTCGCTAGATAGCAGGTAGGGACAGTGGGAATCTCGTTCATCCATT 72484 Query 395 CATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||| | |||||||||||||||||| |||||||||||| Sbjct 72485 CATGTGAGTCACTAATTAGATGACGGGGCATTTGGCTA 72522 Score = 149 bits (164), Expect = 2e-33 Identities = 91/97 (94%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| Sbjct 73887 AAGAGAGTCATAGTTACTCCCGCCATTTACCCGCGCTTCATTGAATTTCTTCACTTTGAA 73946 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||| | ||||||| Sbjct 73947 ATTCAGAGCACTGGGCAGAAATCACATCGTGTCAACA 73983 >seq20664 Length=629704 Score = 109 bits (120), Expect = 2e-21 Identities = 80/93 (86%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||| |||||| |||| || |||||| | | |||||||||||||||||| Sbjct 405424 CTCCCACTTATTTTACACCCCTCATATCTCTTCACAGTGCCAGACTAGAGTCAAGCTCAA 405483 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC 329 ||||||||||| |||| |||||||| ||||||| Sbjct 405484 CAGGGTCTTCTATCCCTGCTGATTCTGCCAAGC 405516 >seq20594 Length=1849262 Score = 98.7 bits (108), Expect = 3e-18 Identities = 60/64 (94%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 473 TTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 |||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 637369 TTGGCTAAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAAC 637428 Query 533 ATCA 536 | || Sbjct 637429 ACCA 637432 >seq80041 Length=986 Score = 78.8 bits (86), Expect = 3e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 ||||| ||||| |||||||||||||||||||||||||| |||||||||| || || || Sbjct 677 TTGAAGTTCTTGACTTTGACATTCAGAGCACTGGGCAGGAATCACATTGTGTTAAGAT 734 >seq30 Length=972167 Score = 78.8 bits (86), Expect = 3e-12 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 ||||| ||||| |||||||||||||||||||||||||| |||||||||| || || || Sbjct 808143 TTGAAGTTCTTGACTTTGACATTCAGAGCACTGGGCAGGAATCACATTGTGTTAAGAT 808200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633798927936