Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq3375 93.3 7e-17 seq14615 82.4 1e-13 seq7708 80.6 4e-13 >seq3375 Length=89888 Score = 93.3 bits (102), Expect = 7e-17 Identities = 90/113 (80%), Gaps = 2/113 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| | | || |||| || || | Sbjct 71740 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGCGTATGCTTGGCTGAGGAGCCACT 71683 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 | |||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 71682 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATC 71630 >seq14615 Length=234242 Score = 82.4 bits (90), Expect = 1e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104 || |||| || || || |||||||||||||||| |||||||| |||||||||||||| Sbjct 199051 TGGCTGAGGAGCCACTGGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAA 198992 Query 105 GTCAGAATCC 114 |||||||||| Sbjct 198991 GTCAGAATCC 198982 >seq7708 Length=2709373 Score = 80.6 bits (88), Expect = 4e-13 Identities = 84/108 (78%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 7 GAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCG 66 |||||||||| |||||| || ||||| | | || |||| || || || ||| Sbjct 2116849 GAGGAACCGCATT-TTCAGA-TATTTGGTGCATATGTTTGGCTGAGGAGTCACTGGTGCG 2116906 Query 67 AAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 2116907 AAGCTACCATCTGTAGGATTATGACTGAATGCCTCTAAGTCAGAATCC 2116954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818520027648