Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015-
12-14] 85,682 sequences; 1,632,718,266 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq19301 131 1e-25
seq3398 131 1e-25
seq77944 127 2e-24
seq6006 98.7 8e-16
seq16819 89.7 4e-13
>seq19301
Length=1192634
Score = 131 bits (144), Expect = 1e-25
Identities = 125/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||| ||||| ||||| || ||||||| |||||||| |||||||||| ||||| ||
Sbjct 383148 GGTGTACTCTACAATCTCTGTGCACAAGTTACTGCATTTGATGGTGCCCAGGTTCTGCTG 383207
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| |||||||| ||||| ||||||||||| | |||||| || ||||||||||| ||
Sbjct 383208 GTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCCGGTCTCTGTCTG 383267
Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
|||||||||||||| | ||| || | |||||||||
Sbjct 383268 AGACTCAATGATGGCATACCACAGCTGCTGAGCCTTCACC 383307
>seq3398
Length=854497
Score = 131 bits (144), Expect = 1e-25
Identities = 125/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||| ||||| |||||||| ||||||| |||||||| |||||||||| ||||| ||
Sbjct 23545 GGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTG 23486
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| || ||||| ||||| ||||||||||| | |||||| || ||||||||||| ||
Sbjct 23485 GTTGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCCGGTCTCTGTCTG 23426
Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
|||||||||||||| | ||| || | |||||||||
Sbjct 23425 AGACTCAATGATGGCATACCACAGCTGCTGAGCCTTCACC 23386
>seq77944
Length=846
Score = 127 bits (140), Expect = 2e-24
Identities = 109/135 (81%), Gaps = 0/135 (0%)
Strand=Plus/Minus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||| ||||| |||||||| ||||||| |||||||| |||||||||| ||||| ||
Sbjct 136 GGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTG 77
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| || ||||| ||||| ||||||||||| | |||||| || ||||||||||| ||
Sbjct 76 GTTGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCCGGTCTCTGTCTG 17
Query 66169 GGACTCAATGATGGC 66183
||||||||||||||
Sbjct 16 AGACTCAATGATGGC 2
>seq6006
Length=139621
Score = 98.7 bits (108), Expect = 8e-16
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || || | ||||| || |||||| | || || ||||| |||||||| |||||||
Sbjct 86888 TGGAGCGATTTACTCAGGAAGTCCAAGTGACTGAAGCCCGTTGCTTCTACGGTTTCCAGA 86829
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372
|||||||||| || ||||||| || ||||||||| | | || || || |||||||
Sbjct 86828 TTGCCATGGAAAACATCCACTCTGAAATGTACAGTCTGTTGATTGACACCTACATCA 86772
>seq16819
Length=1945512
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || || | |||||||| |||||| | || || ||||| |||||||| |||||||
Sbjct 738480 TGGAGCGATTTACTCAGGAGGTCCAAGTGACCGAAGCCCGTTGCTTCTACGGTTTCCAGA 738539
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372
|||| ||||| || | ||||| || ||||||||| | | || || || || ||||
Sbjct 738540 TTGCAATGGAAAACATTCACTCTGAAATGTACAGTCTGTTGATTGACACCTATATCA 738596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397152839864480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |