Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20anshuiensis_20[refseq_20GCF_5F001515605.1_202015- 12-14] 85,682 sequences; 1,632,718,266 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq19301 131 1e-25 seq3398 131 1e-25 seq77944 127 2e-24 seq6006 98.7 8e-16 seq16819 89.7 4e-13 >seq19301 Length=1192634 Score = 131 bits (144), Expect = 1e-25 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| ||||| || ||||||| |||||||| |||||||||| ||||| || Sbjct 383148 GGTGTACTCTACAATCTCTGTGCACAAGTTACTGCATTTGATGGTGCCCAGGTTCTGCTG 383207 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || |||||||| ||||| ||||||||||| | |||||| || ||||||||||| || Sbjct 383208 GTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCCGGTCTCTGTCTG 383267 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 |||||||||||||| | ||| || | ||||||||| Sbjct 383268 AGACTCAATGATGGCATACCACAGCTGCTGAGCCTTCACC 383307 >seq3398 Length=854497 Score = 131 bits (144), Expect = 1e-25 Identities = 125/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| |||||||| ||||||| |||||||| |||||||||| ||||| || Sbjct 23545 GGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTG 23486 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || || ||||| ||||| ||||||||||| | |||||| || ||||||||||| || Sbjct 23485 GTTGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCCGGTCTCTGTCTG 23426 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 |||||||||||||| | ||| || | ||||||||| Sbjct 23425 AGACTCAATGATGGCATACCACAGCTGCTGAGCCTTCACC 23386 >seq77944 Length=846 Score = 127 bits (140), Expect = 2e-24 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| |||||||| ||||||| |||||||| |||||||||| ||||| || Sbjct 136 GGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTG 77 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || || ||||| ||||| ||||||||||| | |||||| || ||||||||||| || Sbjct 76 GTTGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCCGGTCTCTGTCTG 17 Query 66169 GGACTCAATGATGGC 66183 |||||||||||||| Sbjct 16 AGACTCAATGATGGC 2 >seq6006 Length=139621 Score = 98.7 bits (108), Expect = 8e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || || | ||||| || |||||| | || || ||||| |||||||| ||||||| Sbjct 86888 TGGAGCGATTTACTCAGGAAGTCCAAGTGACTGAAGCCCGTTGCTTCTACGGTTTCCAGA 86829 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 |||||||||| || ||||||| || ||||||||| | | || || || ||||||| Sbjct 86828 TTGCCATGGAAAACATCCACTCTGAAATGTACAGTCTGTTGATTGACACCTACATCA 86772 >seq16819 Length=1945512 Score = 89.7 bits (98), Expect = 4e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || || | |||||||| |||||| | || || ||||| |||||||| ||||||| Sbjct 738480 TGGAGCGATTTACTCAGGAGGTCCAAGTGACCGAAGCCCGTTGCTTCTACGGTTTCCAGA 738539 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 |||| ||||| || | ||||| || ||||||||| | | || || || || |||| Sbjct 738540 TTGCAATGGAAAACATTCACTCTGAAATGTACAGTCTGTTGATTGACACCTATATCA 738596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397152839864480