Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq289 93.3 2e-17 seq509 75.2 6e-12 >seq289 Length=2154649 Score = 93.3 bits (102), Expect = 2e-17 Identities = 92/118 (78%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||| || |||| || | | |||| ||| |||| ||||| |||| Sbjct 2065080 GAACCCAAAGACTCGTGGTTTCCCGCACGCTGCCCGGCGGGTCATGGGAATAACGCCGCC 2065021 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 2065020 GGATCGCGGGTCGGCATCGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 2064963 >seq509 Length=882752 Score = 75.2 bits (82), Expect = 6e-12 Identities = 88/118 (75%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||||||| || |||| | | | |||| ||| |||| ||||| |||| Sbjct 227529 GAACCCAAAGACTCGTGGTTTCCTGCACGCTGCCCGGCGGGTCATGGGAATAACGCCGCC 227470 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||| |||| ||| |||||||||||||||||| |||||||| Sbjct 227469 AGATCGCAGGTCGGCATCATTTATGGTCGGAACTACGACGGTATCTGATTGTCTTCGA 227412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278318367030