Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq289 176 8e-42 seq694 149 1e-33 >seq289 Length=2154649 Score = 176 bits (194), Expect = 8e-42 Identities = 218/293 (74%), Gaps = 18/293 (6%) Strand=Plus/Plus Query 35 CCGCATGCCCTTCACTGGGTGTGCCGG-------GGAGCCAGGA-CTTTTACTTTGAAAA 86 ||| |||||||| |||||||| |||| || ||| ||| | ||||||||||||| Sbjct 2064666 CCGGATGCCCTTAGCTGGGTGT-CCGGTCACCTCGGGGCCCGGAGCGTTTACTTTGAAAA 2064724 Query 87 AATTAGAGTGTTCAAAGCAGGCCTTTGCTCG------AATACATTAGCATGGAATAATAG 140 ||||||||||||||||||||||| ||| ||||| ||| |||||||| | Sbjct 2064725 AATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACCGCAGCTAGGAATAATGG 2064784 Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC-GCCGTAATGATTAATAGGGA 199 |||||||| | |||||||||||||| ||||||| | ||| | | |||||||| ||||| Sbjct 2064785 AATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCATGATTAAGAGGGA 2064843 Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259 | |||||| | ||||| | |||||||||||||||||| ||||| Sbjct 2064844 CGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGG 2064903 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 || | |||||||| || ||||| |||||||||||||||| |||||||||| Sbjct 2064904 ACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 2064955 >seq694 Length=581954 Score = 149 bits (164), Expect = 1e-33 Identities = 197/266 (74%), Gaps = 17/266 (6%) Strand=Plus/Plus Query 65 GCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGG----CCTTTGC--TCG 117 ||| ||| | |||||||||||||||||||||||||||||||||| || | || | Sbjct 492605 GCCCGGAGCGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCACCCGTCGCCGCTG 492664 Query 118 AATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAG-G 176 ||||| ||| |||||||| ||||||||| | ||||| |||||||| ||||||| | Sbjct 492665 AATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTTATATTTTGTGGGTTTCTGGAA 492723 Query 177 ACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAA 236 |||| | |||||||| ||||| | |||||| | ||||| | ||||||||| Sbjct 492724 ACCGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAA 492783 Query 237 ATTCTTGGATTTATTG----AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTC 292 |||||| || | | ||||| | | |||||||| || ||||| |||||||| Sbjct 492784 ATTCTT---TTCACCGGCGCAAGACGGAAGAAAGCGAAAGCATTTGCCAAGAATGTTTTC 492840 Query 293 ATTAATCAGTGAACGAAAGTTAGGGG 318 |||||||| |||||||||| || || Sbjct 492841 ATTAATCA-AGAACGAAAGTCAGAGG 492865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914913752896