Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq2611 73.4 1e-10 seq289 73.4 1e-10 >seq2611 Length=82667 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 7/104 (7%) Strand=Plus/Plus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 8949 ACGGTTTCACGCCCTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 9007 Query 330 ACTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 ||| ||| |||||||||| || || ||||||||||||| || Sbjct 9008 ACTTGTTGACTATCGGTC--TC-GTGCCAGTATTTAGCCTTAGA 9048 >seq289 Length=2154649 Score = 73.4 bits (80), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 7/104 (7%) Strand=Plus/Minus Query 270 ACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGT 329 ||||||||| | || || |||| | ||| | ||||||||| |||||||||||||| Sbjct 2060109 ACGGTTTCACGCCCTCTTGAACTCTC-TCTTCAAAGTTCTTTTCAACTTTCCCTCACGGT 2060051 Query 330 ACTAGTTCACTATCGGTCAGTCAGT---AGTATTTAGCCTTGGA 370 ||| ||| |||||||||| || || ||||||||||||| || Sbjct 2060050 ACTTGTTGACTATCGGTC--TC-GTGCCAGTATTTAGCCTTAGA 2060010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241211664768