Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq289 78.8 1e-12 seq694 73.4 5e-11 >seq289 Length=2154649 Score = 78.8 bits (86), Expect = 1e-12 Identities = 85/112 (76%), Gaps = 13/112 (12%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 || ||||||| ||||||||| || | ||||||||| |||||||| ||| |||||| Sbjct 2064819 TCCAGAAACCCACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGCGGTATTC 2064761 Query 65 ---------GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||| |||||||||||||||||||||||| |||| ||||| Sbjct 2064760 AGCGGCGACGGGCG---GCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 2064712 >seq694 Length=581954 Score = 73.4 bits (80), Expect = 5e-11 Identities = 84/112 (75%), Gaps = 7/112 (6%) Strand=Plus/Minus Query 2 GTCTCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTA 61 || || ||||||| |||||||| || | ||||||||| |||||||| ||| ||| Sbjct 492725 GTTTCCAGAAACCCACAAAATATAACCGGA-GTCCTATTCCATTATTCCTAGCTGCAGTA 492667 Query 62 TTCGGGCGTAA------GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||| | | | |||||||||||||||||||||||| |||| ||||| Sbjct 492666 TTCAGCGGCGACGGGTGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 492615 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595019656818