Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq289 104 2e-20 seq694 89.7 5e-16 >seq289 Length=2154649 Score = 104 bits (114), Expect = 2e-20 Identities = 132/179 (74%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG----CCTTTGC--TCGAATACATTAC 66 ||||||||||||||||||||| |||||||||||| || | || |||||| | Sbjct 2064712 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACCGCAG 2064771 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 | |||||||| ||||||||| | |||||||||||||| ||||||| | ||| | | Sbjct 2064772 CTAGGAATAATGGAATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCGGGGCCA 2064830 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 |||| || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 2064831 TGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 2064889 >seq694 Length=581954 Score = 89.7 bits (98), Expect = 5e-16 Identities = 127/176 (72%), Gaps = 7/176 (4%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGG----CCTTTGC--TCGAATACATTAC 66 ||||||||||||||||||||| |||||||||||| || | || |||||| | Sbjct 492615 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCACCCGTCGCCGCTGAATACTGCAG 492674 Query 67 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAA 126 | |||||||| ||||||||| | ||||| |||||||| ||||||| | | | | | Sbjct 492675 CTAGGAATAATGGAATAGGAC-TCCGGTTATATTTTGTGGGTTTCTGGAAACCGGGGCCA 492733 Query 127 TGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||| || | ||| | |||||| | ||||| | | ||||||||||||| Sbjct 492734 TGATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTT 492789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511844866080