Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq343 199 1e-48 seq663 140 1e-30 seq208 86.0 2e-14 >seq343 Length=2000535 Score = 199 bits (220), Expect = 1e-48 Identities = 125/135 (93%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||| Sbjct 1717455 AGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCCATTCTCTTGGCTGTGGTTTCGCTAGA 1717514 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 | | || |||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 1717515 TCGCAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCACGTCACTAATTAGATGA 1717574 Query 418 CGAGGCATTTGGCTA 432 | ||||||||||||| Sbjct 1717575 CAAGGCATTTGGCTA 1717589 Score = 194 bits (214), Expect = 5e-47 Identities = 124/135 (92%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||| Sbjct 1716761 AGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCCATTCTCTTGGCTGTGGTTTCGCTAGA 1716820 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 | | || ||||||||||||||||| |||| |||||||||||| ||||||||||||||||| Sbjct 1716821 TCGCAGGTAGGGACAGTGGGAATCCCGTTCATCCATTCATGCACGTCACTAATTAGATGA 1716880 Query 418 CGAGGCATTTGGCTA 432 | ||||||||||||| Sbjct 1716881 CAAGGCATTTGGCTA 1716895 >seq663 Length=607664 Score = 140 bits (154), Expect = 1e-30 Identities = 89/97 (92%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| Sbjct 318669 AAGAGAGTCATAGTTACTCCCGCCATTTACCCGCTCTTCATTGAATTTCTTCACTTTGAA 318610 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| ||||||||||||| | ||||||| Sbjct 318609 ATTCAGAGCACTGAGCAGAAATCACATGGTGTCAACA 318573 Score = 140 bits (154), Expect = 1e-30 Identities = 89/97 (92%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 437 AAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| Sbjct 322621 AAGAGAGTCATAGTTACTCCCGCCATTTACCCGCTCTTCATTGAATTTCTTCACTTTGAA 322562 Query 497 ATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||| ||||||||||||| | ||||||| Sbjct 322561 ATTCAGAGCACTGAGCAGAAATCACATGGTGTCAACA 322525 >seq208 Length=2381298 Score = 86.0 bits (94), Expect = 2e-14 Identities = 71/89 (80%), Gaps = 12/89 (13%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 |||||||||||||||||||||||||||||||| |||| ||| || ||| || Sbjct 1992611 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTATCCGCACTTCATTAAATGTC-------- 1992560 Query 494 GACATTCAGAGCACTGGGCAGAAATCACA 522 ||||||||||||||||||||||||| Sbjct 1992559 ----TTCAGAGCACTGGGCAGAAATCACA 1992535 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634688558496