Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20grahami_20[refseq_20GCF_5F001515645.1_202015-12- 16] 31,277 sequences; 1,750,287,761 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq2561 84.2 4e-14 seq2021 84.2 4e-14 seq393 80.6 4e-13 >seq2561 Length=48765 Score = 84.2 bits (92), Expect = 4e-14 Identities = 96/125 (77%), Gaps = 3/125 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | |||||| | ||||| || | | |||| || || | Sbjct 18658 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGCGTGTGCTTTGCTGAAGAGCCACT 18601 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | || ||||||| ||||| |||||||| ||||| |||||||||||||||||| |||| Sbjct 18600 GGTGCAAAGCTACTATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGAATCC-TGCCT 18542 Query 121 GAACG 125 |||| Sbjct 18541 AAACG 18537 >seq2021 Length=103413 Score = 84.2 bits (92), Expect = 4e-14 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 7 GAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCG 66 ||||||||||| |||||| || ||||| | | || |||| || || || ||| Sbjct 67289 GAGGAACCGCGTT-TTCAGA-TATTTGGTGCATATGTTTGGCTGAGGAGTCACTGGTGCG 67232 Query 67 AAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 67231 AAGCTACCATCTGTAGGATTATGACTGAATGCCTCTAAGTCAGAATCC 67184 >seq393 Length=989769 Score = 80.6 bits (88), Expect = 4e-13 Identities = 84/108 (78%), Gaps = 2/108 (2%) Strand=Plus/Plus Query 7 GAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCG 66 |||||||||| |||||| || ||||| | | || |||| || || || ||| Sbjct 8940 GAGGAACCGCATT-TTCAGA-TATTTGGTGCATATGTTTGGCTGAGGAGTCACTGGTGCG 8997 Query 67 AAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||||||| |||||||| ||||| |||||||||||||||||| Sbjct 8998 AAGCTACCATCTGTAGGATTATGACTGAATGCCTCTAAGTCAGAATCC 9045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818951785728