Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq24714 93.3 2e-17
seq25972 87.8 1e-15
seq37596 78.8 5e-13
seq30399 77.0 2e-12
>seq24714
Length=931
Score = 93.3 bits (102), Expect = 2e-17
Identities = 92/118 (78%), Gaps = 1/118 (1%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||||||||| || |||| || | | |||| ||| |||| ||||| ||||
Sbjct 798 GAACCCAAAGACTCGTGGTTTCCCGCATGCTGCCTGGCGGGTCATCGGAATAACGCCGCC 857
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| | |||||||| ||||||||| | |||||||||||||||||||||||||||
Sbjct 858 GGATTGCGGGTCGGCATCGTTTACGGTCAGAACTACGACGGTATCTGATCGTCTTCGA 915
>seq25972
Length=890
Score = 87.8 bits (96), Expect = 1e-15
Identities = 91/118 (77%), Gaps = 1/118 (1%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||||||||| || |||| || | | |||| ||| |||| |||| ||||
Sbjct 552 GAACCCAAAGACTCGTGGTTTCCCGCATGCTGCCCGGCGGGTCATGGGAATAATGCCGCC 493
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| | |||||||| ||||||||| | |||||||||||||||||||||||||||
Sbjct 492 AGATTGCGGGTCGGCATCGTTTACGGTCAGAACTACGACGGTATCTGATCGTCTTCGA 435
>seq37596
Length=41952
Score = 78.8 bits (86), Expect = 5e-13
Identities = 89/117 (76%), Gaps = 2/117 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACAT-CGC 58
||||||||||||| || |||| | | | |||| || | |||| | ||||| |||
Sbjct 21860 GAACCCAAAGACTCGTGGTTTCCTGCACGCTGCCCAGAGGGTCATAGGAATAACGCGCGC 21801
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
| |||| | ||| |||| ||||||||| |||||||||||||||||||||||||
Sbjct 21800 CGGATCGCGGGTCCGCATCGTTTACGGTCGGAACTACGACGGTATCTGATCGTCTTC 21744
>seq30399
Length=449406
Score = 77.0 bits (84), Expect = 2e-12
Identities = 90/119 (76%), Gaps = 2/119 (2%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTT-TGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||||||||| || |||| | | | |||| ||| |||| ||||| ||||
Sbjct 310714 GAACCCAAAGACTCGTGGTTTCCTGCACGCTGCCCGGCGGGTCATGGGAATAACGCCGCC 310655
Query 60 CGATCCCTAG-TCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| | | ||||||| ||||||||| ||||||||||||||||||| |||||||
Sbjct 310654 GGATCGCGGGGTCGGCATCGTTTACGGTCGGAACTACGACGGTATCTGATCATCTTCGA 310596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 277971508470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |