Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq30399 170 3e-40
>seq30399
Length=449406
Score = 170 bits (188), Expect = 3e-40
Identities = 218/293 (74%), Gaps = 18/293 (6%)
Strand=Plus/Plus
Query 35 CCGCATGCCCTTCACTGGGTGTGCCGG-------GGAGCCAGGA-CTTTTACTTTGAAAA 86
||| |||||||| ||||||||| |||| || ||| ||| | |||||||||||||
Sbjct 310299 CCGGATGCCCTTAACTGGGTGT-CCGGTCACCTTGGGGCCCGGAGCGTTTACTTTGAAAA 310357
Query 87 AATTAGAGTGTTCAAAGCAGG----CCTTTGC--TCGAATACATTAGCATGGAATAATAG 140
||||||||||||||||||||| || | || |||||| ||| |||||||| |
Sbjct 310358 AATTAGAGTGTTCAAAGCAGGCCGCCCGTCGCCGCTGAATACTGCAGCTAGGAATAATGG 310417
Query 141 AATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGA-CCGCCGTAATGATTAATAGGGA 199
|||||||| | |||||||||||||| ||||||| | | || | ||||| || |||||
Sbjct 310418 AATAGGAC-TCCGGTTCTATTTTGTGGGTTTCTGGAACCCAGGGGCATGATAAAGAGGGA 310476
Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259
| | |||||| | ||||| | ||||||| |||||||||| |||||
Sbjct 310477 TGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGTAATTCTTGGACCGGCGCAAGACGG 310536
Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
|| | |||||||| || ||||| |||||||||||||||| ||||||||||
Sbjct 310537 ACGAAAGCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 310588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 913697488704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |