Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq18384 143 1e-31
seq7953 100 1e-18
seq6983 100 1e-18
>seq18384
Length=957298
Score = 143 bits (158), Expect = 1e-31
Identities = 102/117 (87%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
||| |||||||||||||||||||||||||| |||| |||||||| |||||| ||||||
Sbjct 34399 TGGTACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGGGGAAACCCTGGTG 34458
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||| ||||||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 34459 GAGGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 34515
Score = 131 bits (144), Expect = 7e-28
Identities = 125/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 33600 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 33659
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| |||| ||||||||||| ||||||| |||| ||||| ||||||| |||||| |
Sbjct 33660 ACTGGCACGAGACCGATAGTCAACAAGTACCGTGAGGGAAAGTTGAAAAGAACTTTGAAG 33719
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 33720 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 33759
>seq7953
Length=6969
Score = 100 bits (110), Expect = 1e-18
Identities = 99/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 72 GGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAG 131
||| |||||| | | ||||| |||||||| |||| ||||||||||| ||||||| |
Sbjct 5319 GGGTGGTAAACTCCATCTAAGGCTAAATACTGGCACGAGACCGATAGTCAACAAGTACCG 5260
Query 132 TGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAA 191
||| ||||| ||||||| |||||| | |||||||| || || ||||||| ||| | |
Sbjct 5259 TGAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTAAGA 5200
Query 192 GGGAAGCG 199
|| || ||
Sbjct 5199 GGTAAACG 5192
>seq6983
Length=269374
Score = 100 bits (110), Expect = 1e-18
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 52 TTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGA 111
||||||||||||| | || |||| |||||| | | ||||| |||||||| |||| ||||
Sbjct 84178 TTGGGAATGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAATACTGGCACGAGA 84119
Query 112 CCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
||||||| ||||||| |||| ||||| ||||||| ||||||
Sbjct 84118 CCGATAGTCAACAAGTATCGTGAGGGAAAGTTGAAAAGAACTTTG 84074
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2076478489150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |