Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq5589 333 1e-88 >seq5589 Length=602 Score = 333 bits (368), Expect = 1e-88 Identities = 386/518 (75%), Gaps = 22/518 (4%) Strand=Plus/Minus Query 91 CCCCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATG 150 |||||||| | |||||||||||| || | | | | ||| || |||||||| Sbjct 554 CCCCCTAGCCTTAACAGTGCTCTACCCCCAGTAGTATTCGTCCGAGGCGCTACCTAAATA 495 Query 151 CATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGT 210 ||||||||||||||||||||| | |||||||||||||||||||||| | |||||||| Sbjct 494 GCTTTCGGGGAGAACCAGCTATCTCCGAGTTTGATTGGCCTTTCACCCCCAGCCACAGGT 435 Query 211 CATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTC 270 |||||||| | ||| |||| | |||||||||||||||||| | | |||| | |||| Sbjct 434 CATCCCCTAACTTTGCAACGTTAGTGGGTTCGGTCCTCCAGTTGATGTTACTCAACCTTC 375 Query 271 AACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTA 330 ||||||||||||| |||||||| | ||||||||| | | ||| ||| | |||||| Sbjct 374 AACCTGCCCATGGCTAGATCACCCGGTTTCGGGTCTACACCTTGCAACT-AGACGCCCAG 316 Query 331 TTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAAC 390 || |||||| |||| |||||||| ||| | || |||||||||||| ||| || | || Sbjct 315 TTAAGACTCGGTTTCCCTACGGCTCCCCTATAC-GGTTAACCTCGCTACAAAATG-TAAG 258 Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCAC-------- 442 |||| | | |||| | ||| | ||| | | | ||| || |||||| || Sbjct 257 TCGCTGACCCATTATACAATACGCA-GTCATGACCCATTATACAAAAGGTACGCAGTCAC 199 Query 443 ---------TTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCC 493 | | ||||| || | ||||| | | | |||||||||| ||||||||||||| Sbjct 198 GGTCTCAAGTACCGCTCCCACTGCTTGTACGTATACGGTTTCAGGTTCTATTTCACTCCC 139 Query 494 CGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGA 552 | | ||||||| |||||| |||||||||||||||||| || | |||||||||| |||| Sbjct 138 CTCACAGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGA 79 Query 553 GTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590 |||||||| ||| || ||||||| ||| ||||| || Sbjct 78 GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGAC 41 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1814615991552