Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq5589 333 1e-88
>seq5589
Length=602
Score = 333 bits (368), Expect = 1e-88
Identities = 386/518 (75%), Gaps = 22/518 (4%)
Strand=Plus/Minus
Query 91 CCCCCTAGACCATCCAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATG 150
|||||||| | |||||||||||| || | | | | ||| || ||||||||
Sbjct 554 CCCCCTAGCCTTAACAGTGCTCTACCCCCAGTAGTATTCGTCCGAGGCGCTACCTAAATA 495
Query 151 CATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGT 210
||||||||||||||||||||| | |||||||||||||||||||||| | ||||||||
Sbjct 494 GCTTTCGGGGAGAACCAGCTATCTCCGAGTTTGATTGGCCTTTCACCCCCAGCCACAGGT 435
Query 211 CATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTC 270
|||||||| | ||| |||| | |||||||||||||||||| | | |||| | ||||
Sbjct 434 CATCCCCTAACTTTGCAACGTTAGTGGGTTCGGTCCTCCAGTTGATGTTACTCAACCTTC 375
Query 271 AACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTA 330
||||||||||||| |||||||| | ||||||||| | | ||| ||| | ||||||
Sbjct 374 AACCTGCCCATGGCTAGATCACCCGGTTTCGGGTCTACACCTTGCAACT-AGACGCCCAG 316
Query 331 TTCGGACTCGCTTTCGCTACGGCTACCCCACACGGGTTAACCTCGCGACACAACGCAAAC 390
|| |||||| |||| |||||||| ||| | || |||||||||||| ||| || | ||
Sbjct 315 TTAAGACTCGGTTTCCCTACGGCTCCCCTATAC-GGTTAACCTCGCTACAAAATG-TAAG 258
Query 391 TCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCAC-------- 442
|||| | | |||| | ||| | ||| | | | ||| || |||||| ||
Sbjct 257 TCGCTGACCCATTATACAATACGCA-GTCATGACCCATTATACAAAAGGTACGCAGTCAC 199
Query 443 ---------TTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCACTCCC 493
| | ||||| || | ||||| | | | |||||||||| |||||||||||||
Sbjct 198 GGTCTCAAGTACCGCTCCCACTGCTTGTACGTATACGGTTTCAGGTTCTATTTCACTCCC 139
Query 494 CGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAAGGA 552
| | ||||||| |||||| |||||||||||||||||| || | |||||||||| ||||
Sbjct 138 CTCACAGGGGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGA 79
Query 553 GTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACAC 590
|||||||| ||| || ||||||| ||| ||||| ||
Sbjct 78 GTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGAC 41
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1814615991552
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |