Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq44214 86.0 4e-15
seq15521 86.0 4e-15
seq3013 86.0 4e-15
seq32350 77.0 2e-12
seq24714 77.0 2e-12
seq4462 77.0 2e-12
>seq44214
Length=1357772
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 645449 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 645506
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 645507 TAAT-CAACGCGAGCT 645521
>seq15521
Length=621416
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 273419 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 273362
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 273361 TAAT-CAACGCGAGCT 273347
>seq3013
Length=830
Score = 86.0 bits (94), Expect = 4e-15
Identities = 67/76 (88%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 145 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 88
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 87 TAAT-CAACGCGAGCT 73
>seq32350
Length=148373
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||| ||||| || ||||||||||||||||
Sbjct 102526 CTCACTAAACCATC-CAATCGGTAGTA-GCGACAGGCGGTGTATACAAAGGGCAGGGACT 102583
Query 109 TAATACAACGCAAGCT 124
|||| ||| |||||||
Sbjct 102584 TAAT-CAATGCAAGCT 102598
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||| ||||| || ||||||||||||||||
Sbjct 103791 CTCACTAAACCATC-CAATCGGTAGTA-GCGACAGGCGGTGTATACAAAGGGCAGGGACT 103848
Query 109 TAATACAACGCAAGCT 124
|||| ||| |||||||
Sbjct 103849 TAAT-CAATGCAAGCT 103863
>seq24714
Length=931
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || || |||||| | ||||||||| |||||||||||||||||||
Sbjct 187 CTCACTAAACCATC-CAATCAGTAGTA-GTGACGGGCGGTGTGTACAAAGGGCAGGGACT 244
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 245 TAAT-CAACGCGAGCT 259
>seq4462
Length=1199
Score = 77.0 bits (84), Expect = 2e-12
Identities = 65/76 (86%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||| | |||| || || |||||| ||||||||||| |||||||||||||||||||
Sbjct 410 CTCACTTAACCATC-CAATCTGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 467
Query 109 TAATACAACGCAAGCT 124
|||| |||||| ||||
Sbjct 468 TAAT-CAACGCGAGCT 482
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300337032140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |