Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq5589 295 2e-77
>seq5589
Length=602
Score = 295 bits (326), Expect = 2e-77
Identities = 239/286 (84%), Gaps = 4/286 (1%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60
|||||| ||| ||||| | ||| || ||||||||||||||||| |||||||| ||||
Sbjct 306 CGAGTCTTAACTGGGCGTCTAGTTGCAAGGTGTAGACCCGAAACCGGGTGATCTAGCCAT 365
Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120
|| |||| ||||||| |||||| ||||||| ||||||||||||| |||| ||| |
Sbjct 366 GGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCCACTAACGTTGCAAAGT 425
Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180
|||||||||| |||||| | |||||||||||| || |||||| ||| |||||||||||||
Sbjct 426 TAGGGGATGACCTGTGGCTGGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGTTCTC 485
Query 181 TCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTAT 238
|||||| |||||||||||| ||||| | | || || | ||||||||||||||||||
Sbjct 486 CCCGAAAGCTATTTAGGTAGCGCCTCGGACGAAT-ACTACTGGGGGTAGAGCACTGTTAA 544
Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAAT 284
|||||||||||||| ||||||||||| || |||||||||||||||
Sbjct 545 GGCTAGGGGGTCATCCCGACTTACCAACCCTTTGCAAACTCCGAAT 590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1686826132992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |