Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq5589 295 2e-77 >seq5589 Length=602 Score = 295 bits (326), Expect = 2e-77 Identities = 239/286 (84%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| ||| ||||| | ||| || ||||||||||||||||| |||||||| |||| Sbjct 306 CGAGTCTTAACTGGGCGTCTAGTTGCAAGGTGTAGACCCGAAACCGGGTGATCTAGCCAT 365 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 || |||| ||||||| |||||| ||||||| ||||||||||||| |||| ||| | Sbjct 366 GGGCAGGTTGAAGGTTGAGTAACATCAACTGGAGGACCGAACCCACTAACGTTGCAAAGT 425 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 |||||||||| |||||| | |||||||||||| || |||||| ||| ||||||||||||| Sbjct 426 TAGGGGATGACCTGTGGCTGGGGGTGAAAGGCCAATCAAACTCGGAGATAGCTGGTTCTC 485 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTAT 238 |||||| |||||||||||| ||||| | | || || | |||||||||||||||||| Sbjct 486 CCCGAAAGCTATTTAGGTAGCGCCTCGGACGAAT-ACTACTGGGGGTAGAGCACTGTTAA 544 Query 239 GGCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAAT 284 |||||||||||||| ||||||||||| || ||||||||||||||| Sbjct 545 GGCTAGGGGGTCATCCCGACTTACCAACCCTTTGCAAACTCCGAAT 590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1686826132992