Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015-
12-14] 164,173 sequences; 1,655,786,410 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq35453 100 5e-19
seq22618 100 5e-19
seq19761 78.8 2e-12
seq14474 78.8 2e-12
seq30144 75.2 2e-11
>seq35453
Length=221401
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | || |||| || || |
Sbjct 149414 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGCGTGTGCTTGGCTGAGGAGCCACT 149471
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 149472 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 149525
>seq22618
Length=5300
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| || | || |||| || || |
Sbjct 3745 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGCGTGTGCTTGGCTGAGGAGCCACT 3802
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 3803 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 3856
>seq19761
Length=112691
Score = 78.8 bits (86), Expect = 2e-12
Identities = 75/95 (79%), Gaps = 1/95 (1%)
Strand=Plus/Plus
Query 20 ATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTG 79
||||||| | ||||| || | || |||| || || || || |||||||||||||
Sbjct 52043 ATTCAGAC-ATTTGGTGCGTGTGCTTGGCTGAGGAGCCACTGGTGCAAAGCTACCATCTG 52101
Query 80 CTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||| ||||||||||||||||||||||||
Sbjct 52102 TGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 52136
>seq14474
Length=800118
Score = 78.8 bits (86), Expect = 2e-12
Identities = 48/51 (94%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
|||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 516361 GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 516311
>seq30144
Length=986368
Score = 75.2 bits (82), Expect = 2e-11
Identities = 59/71 (83%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 45 TGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAA 104
|| |||| || || || |||||||||||||||| |||||||| |||| ||||||||
Sbjct 451409 TGGCTGAGGAGTCACTGGTGCGAAGCTACCATCTGTAGGATTATGATTGAATGCCTCTAA 451468
Query 105 GTCAGAATCCA 115
|||||||||||
Sbjct 451469 GTCAGAATCCA 451479
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 817897123072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |