Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sinocyclocheilus_20rhinocerous_20[refseq_20GCF_5F001515625.1_202015- 12-14] 164,173 sequences; 1,655,786,410 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq147642 127 2e-24 seq15552 127 2e-24 seq19765 98.7 8e-16 seq34520 95.1 1e-14 >seq147642 Length=763 Score = 127 bits (140), Expect = 2e-24 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| ||||| || ||||||| |||||||| |||||||||| ||||| || Sbjct 628 GGTGTACTCTACAATCTCTGTGCACAAGTTACTGCATTTGATGGTGCCCAGGTTCTGCTG 687 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || |||||||| ||||| ||||||||||| | |||||| || ||||||||||| || Sbjct 688 GTTGCTCTTGCGGTTGCAGGCATCCTTGTAGAGCATGTAGGGTGTGCCGGTCTCTGTCTG 747 Query 66169 GGACTCAATGATGGC 66183 |||||||||||||| Sbjct 748 AGACTCAATGATGGC 762 >seq15552 Length=1137653 Score = 127 bits (140), Expect = 2e-24 Identities = 109/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| |||||||| ||||||| |||||||| |||||||||| ||||| || Sbjct 1133833 GGTGTACTCTACAATTTCTGTGCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTG 1133774 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || || ||||| ||||| ||||||||||| | |||||| || ||||||||||| || Sbjct 1133773 GTTGCTTTTGCGGTTGCAGGCATCCTTGTAAAGCATGTAGGGTGTGCCGGTCTCTGTCTG 1133714 Query 66169 GGACTCAATGATGGC 66183 |||||||||||||| Sbjct 1133713 AGACTCAATGATGGC 1133699 Score = 107 bits (118), Expect = 2e-18 Identities = 107/139 (77%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 66070 GCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGC 66129 ||||| |||||||| |||||||||| ||||| || || || ||||| ||||| || Sbjct 1133700 GCACAAGTTACTGCATTTAATGGTGCCCAGGTTCTGCTGGTTGCTTTTGCGGTTGCAGGC 1133641 Query 66130 ATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCA 66189 ||||||||| | |||||| || ||||||||||| || |||||||||||||| | ||| Sbjct 1133640 ATCCTTGTAAAGCATGTAGGGTGTGCCGGTCTCTGTCTGAGACTCAATGATGGCATACCA 1133581 Query 66190 AAGAGCGCGTGCCTTCACC 66208 || | ||||||||| Sbjct 1133580 CAGCTGCTGAGCCTTCACC 1133562 >seq19765 Length=1114994 Score = 98.7 bits (108), Expect = 8e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || || | |||||||| |||||| | || || ||||| |||||||| ||||||| Sbjct 413793 TGGAGCGATTTACTCAGGAGGTCCAAGTGACCGAAGCCCGTTGCTTCTACGGTTTCCAGA 413852 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 |||| ||||| || ||||||| || ||||||||| | | || || || ||||||| Sbjct 413853 TTGCAATGGAAAACATCCACTCTGAAATGTACAGTCTGTTGATTGACACCTACATCA 413909 >seq34520 Length=2775569 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || || | ||||| || |||||| | || || || || |||||||| ||||||| Sbjct 504655 TGGAGCGATTTACTCAGGAAGTCCAAGTGACTGAAGCCCGCTGCTTCTACGGTTTCCAGA 504714 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 |||||||||| || ||||||| || ||||||||| | | || || || ||||||| Sbjct 504715 TTGCCATGGAAAACATCCACTCTGAAATGTACAGTCTGTTGATTGACACCTACATCA 504771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396772522712720