Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq721 145 3e-32 seq261 123 1e-25 seq301 120 1e-24 seq16 102 3e-19 seq286 100 1e-18 seq508 98.7 4e-18 >seq721 Length=337173 Score = 145 bits (160), Expect = 3e-32 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| | ||||||||||| |||||| |||||||| Sbjct 120737 GGACCCGAAAGATGGTGAACTATGCCTGGGCAAGGTGAAGCCAGGGGAAACCCTGGTGGA 120678 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||| ||||||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 120677 GGCCCGCAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 120623 >seq261 Length=616988 Score = 123 bits (136), Expect = 1e-25 Identities = 95/113 (84%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| || | ||||||||||||||| |||||||| Sbjct 595961 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGAGCGAAGCCAGAGGAAACCCTGGTGGA 595902 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||| | || ||| ||| |||||||||| | ||| || ||||||||||||| Sbjct 595901 GGCCTGTAGTGGTCCTGACGTGCAAATCAGTTGTCCAACCTGGGTATAGGGGC 595849 Score = 109 bits (120), Expect = 2e-21 Identities = 114/150 (76%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106 |||||||||||||||||| | || ||| |||||| | | | ||| ||||||||||||| Sbjct 596583 GTTGTTTGGGAATGCAGCCCAAAGAGGGTGGTAAACTCCATGTAAGGCTAAATATTGGCA 596524 Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 ||||||||||| ||||||| | |||| ||||||| |||||| | ||||||| Sbjct 596523 CGAGACCGATAGTTGACAAGTACCTTACGACAAAGTTGAAAAGAACTTTGAAGAGAGAGT 596464 Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 | || || ||||||| ||| | ||| || Sbjct 596463 TCAAGAGGGCGTGAAACCGTTAAGAGGTAA 596434 >seq301 Length=619715 Score = 120 bits (132), Expect = 1e-24 Identities = 93/111 (84%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 573 CCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCT 632 |||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||| Sbjct 437800 CCGAAAGATGGTGAGCTATGCCTGGGCAGGGCGAAGCCAGGGGAAACTCTGGTGGAGGCC 437741 Query 633 CGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||| || | ||||||||| | || | ||||||||||||||| Sbjct 437740 CGCAGCGGTCTTGACATGCAAATCGGTGGTTCGACCTGGGTATAGGGGCGA 437690 >seq16 Length=1912977 Score = 102 bits (112), Expect = 3e-19 Identities = 112/149 (75%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 ||| | ||||| |||||||||||||||||| | || ||| |||||| | | ||||| | Sbjct 1814498 TTCTAGGAGTCCGGTTGTTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGG 1814557 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 ||||||| ||| |||||||||| |||||| | | ||||| ||||| | ||| Sbjct 1814558 CTAAATACCGGCACGAGACCGATAATCAGCAAGTACCTTAAGGGAAAGTTGAAAGGAACT 1814617 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAA 182 ||| | |||||||| | || |||||||| Sbjct 1814618 TTGAAGAGAGAGTTCGAGAGGACGTGAAA 1814646 >seq286 Length=612266 Score = 100 bits (110), Expect = 1e-18 Identities = 87/108 (81%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635 ||||||||||| | || |||| ||| |||||||| |||| ||||||||||||| | | Sbjct 100916 AAAGATGGTGACCCATACCTGGGCAGGCCGAAGCCAGGGGAAGCTCTGGTGGAGGCCCAC 100857 Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||| ||| ||||||||||| | ||| || |||||| |||||||| Sbjct 100856 TGCGGTCCTGACGTGCAAATCGGTTGTCCAACCTGGGTACAGGGGCGA 100809 >seq508 Length=410445 Score = 98.7 bits (108), Expect = 4e-18 Identities = 94/118 (80%), Gaps = 7/118 (6%) Strand=Plus/Minus Query 571 ACCCGAAA-GATGGTGAACTATGCCTGAATAGGGTGAAGCCAG-AGGAAACT-----CTG 623 |||||||| |||||||||||||||||| |||| |||||||| || ||||| | | Sbjct 22905 ACCCGAAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGGAGAAAACTGAAAACAG 22846 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||||||| | |||| || ||| ||||||||||| | ||| | ||||||||||||| Sbjct 22845 GTGGAGGCCCTCAGCAGTCCTGACGTGCAAATCGGTTGTCTGACCTGGGTATAGGGGC 22788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079875203900