Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1476 91.5 2e-16 seq16 86.0 1e-14 seq348 82.4 1e-13 seq221 82.4 1e-13 >seq1476 Length=202119 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 || ||||||||||||| | |||||| | ||||| | || | || ||| || || | Sbjct 187860 GTGCGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGGGGAGCCAAT 187917 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||||| |||||||| |||||| ||||||||||||||||| Sbjct 187918 GGTGCGAAGCTACCATCTGTGGGATTATGACTGAACACCTCTAAGTCAGAATCC 187971 >seq16 Length=1912977 Score = 86.0 bits (94), Expect = 1e-14 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| || ||||||| | | |||||| | ||||| |||| | || |||| || || | Sbjct 1816390 GTATGACAGGAACCACAGG-TTCAGAC-ATTTGGTGTTTGTGCTTGGCTGAGGAGCCAAT 1816447 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | | |||||||||||||| |||||||| |||||| ||||||||||||||||| Sbjct 1816448 GGTGTGAAGCTACCATCTGTGGGATTATGACTGAACACCTCTAAGTCAGAATCC 1816501 >seq348 Length=518478 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| |||||||||| | |||||| || |||| | || | || |||| || |||| Sbjct 81018 GTATGAGAGGAACCAAAGG-TTCAGA-TATTTGGAGTATGTGCTTGACTGATGAGCCAGT 80961 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | || ||||||||||||| |||||| |||||||||||||||||||||||| Sbjct 80960 GGTGCAAAGCTACCATCTGTGAAATTATGACTGAACGCCTCTAAGTCAGAATCC 80907 >seq221 Length=621745 Score = 82.4 bits (90), Expect = 1e-13 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 32 TGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGGC 91 |||| | || | ||| ||||| || || || ||||||||||||||||| |||||||| | Sbjct 94175 TGGTATATGTGCCTGGCTGACGAGCCAATGGTGCGAAGCTACCATCTGCAGGATTATGAC 94234 Query 92 TGAACGCCTCTAAGT 106 ||||||||||||||| Sbjct 94235 TGAACGCCTCTAAGT 94249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819153828352