Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13]
5,818 sequences; 800,491,834 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq755 255 5e-63
seq1980 98.7 8e-16
seq1579 87.8 1e-12
seq35 86.0 5e-12
>seq755
Length=318311
Score = 255 bits (282), Expect = 5e-63
Identities = 758/1153 (66%), Gaps = 37/1153 (3%)
Strand=Plus/Plus
Query 65423 TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGT 65482
|||| || || |||||||||||||| || | ||| ||||||||| ||| ||
Sbjct 109877 TTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCC 109936
Query 65483 TCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACC 65542
|| | ||| || |||| || || || ||||| || || || || ||||| || || | |
Sbjct 109937 TCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGC 109996
Query 65543 AACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC 65602
| || ||| | || ||||| | | || || | || | ||||| ||||
Sbjct 109997 AGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCAC 110056
Query 65603 ATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCC 65662
| ||| ||| || | || | ||||| || | |||||| | || | ||| |
Sbjct 110057 A--GGTCGGTCGGCGTCTTCTCC----CACATGTCGTACTGCAGGATGCCCTTGCTGACT 110110
Query 65663 GGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCG 65722
|| || || | | | ||||| || ||| || || | ||||| | |||
Sbjct 110111 GGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCC 110170
Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782
|| || || | || ||||||||||| ||| | || || | ||||| |||
Sbjct 110171 AGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTT 110230
Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842
|| |||| || ||| |||| || | ||| || | |||||| ||||| || |||||
Sbjct 110231 TCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATC 110290
Query 65843 GGACGATGACGCAAATTGGAACGTCTC-GCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901
|| | || ||| |||||| |||| || ||||| || |||||||| ||||| |||||
Sbjct 110291 GGCCTGTGGCGCTTGTTGGAAT-TCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGAT 110349
Query 65902 AATGCGATTCAAATTGCGTGTC-ACCACATGCACGA--TACGTCGCAATTGTTCGAAATC 65958
||| |||| || || | | || | || |||| | | || || || ||
Sbjct 110350 AATCTTGTTCAGGTTTT-TGACGATTACTTTGGTGACATACGCC--AGTTTTTTAAAGTC 110406
Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018
|||| | || || || ||| || ||| ||| ||||| | || ||
Sbjct 110407 AAAA------GTCCGCTCCGGGGTGACGTACATG------TTG---AGGGCGATGGAGGC 110451
Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078
|| || ||||| |||| ||||||| | ||| || ||||| ||||| ||||| || ||
Sbjct 110452 CAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTT 110511
Query 66079 ACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTA 66138
||||| |||||||||| |||||| || || ||||| | ||||| || || |||||
Sbjct 110512 GCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTA 110571
Query 66139 CATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCG 66198
|| ||||||||| || || ||||| || ||||| |||||||||| ||| || |
Sbjct 110572 CAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCTGCTG 110631
Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAA-TGTTCGTAGAGGTGTTCGA 66257
||||||||| ||| ||||| |||| || || || | |||||| | || |
Sbjct 110632 AGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGT-GTAGAGCTCCTCAA 110690
Query 66258 AGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAAT 66317
| || ||||| ||| ||| | ||||| || ||||||||||| ||||| |
Sbjct 110691 ACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGAGACCAGT 110750
Query 66318 CACCATCCTGTTCTACACGACG--CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375
| | || ||| ||| ||| || ||||| || ||||| ||||||||||| ||
Sbjct 110751 CCTGGT--TGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAG 110808
Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434
|| | || | |||||||| | || ||| || || || |||||||| || || |
Sbjct 110809 GTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCGAGGAAGTCGAACA 110867
Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494
||| ||||| || |||| ||| |||||||| | || | ||| |||||| |
Sbjct 110868 CGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCT 110927
Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554
|||||||||| || || |||||| | || | || ||| || ||||||||||| || |
Sbjct 110928 GGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGT 110987
Query 66555 TGCCATTGGTGCC 66567
|||||||||| ||
Sbjct 110988 TGCCATTGGTACC 111000
>seq1980
Length=102293
Score = 98.7 bits (108), Expect = 8e-16
Identities = 128/177 (72%), Gaps = 0/177 (0%)
Strand=Plus/Plus
Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108
||| ||||| || || || ||||||||||| ||| | |||||||||| ||| || ||
Sbjct 5471 GGTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTG 5530
Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168
|| ||||| | ||||| || ||||| || | |||||| || || ||||| || ||
Sbjct 5531 GTTGCTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCCGGTTTCTGTCTG 5590
Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACC 66225
||||| |||| ||||| ||| || | ||||||||| |||| ||||| ||
Sbjct 5591 TGACTCGATGACGGCGTACCACAGCTGCTGAGCCTTCACCACACGTCTTGCCCTGCC 5647
>seq1579
Length=169011
Score = 87.8 bits (96), Expect = 1e-12
Identities = 78/98 (80%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101
|| ||||||||||| ||||| | ||||||||| |||| | || || |||| ||||||
Sbjct 242 GATAATCCTCGTCGCTTCGTCATCTTCCCCATCCAGTACCACGACATCTGGCAGATGTAC 183
Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139
|| ||||| || || || |||||||||| ||||||||
Sbjct 182 AAGAAGGCCGAGGCCTCGTTCTGGACGGCAGAGGAGGT 145
>seq35
Length=1322159
Score = 86.0 bits (94), Expect = 5e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||| ||||| | | || || |||| |||||| |||||||||| ||| |||| |
Sbjct 416277 CAGGAAGTGCAGATCCCTGAAGCACGTTCCTTCTACAGCTTCCAGATCCTCATAGAGACT 416218
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||| |||||||||||| | |||||| | || |||||||| ||
Sbjct 416217 GTTCACTCCGAGATGTACAGTATGCTCATCAACACTTACATCAGAGA 416171
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397539809695520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |