Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Stegastes_20partitus_20[refseq_20GCF_5F000690725.1_202014-05-13] 5,818 sequences; 800,491,834 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq755 255 5e-63 seq1980 98.7 8e-16 seq1579 87.8 1e-12 seq35 86.0 5e-12 >seq755 Length=318311 Score = 255 bits (282), Expect = 5e-63 Identities = 758/1153 (66%), Gaps = 37/1153 (3%) Strand=Plus/Plus Query 65423 TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGT 65482 |||| || || |||||||||||||| || | ||| ||||||||| ||| || Sbjct 109877 TTGACGATCTGAAACTCGCCGGACAGAACCCTGCGGGTGTAGATGTTGCTGGTGTAGGCC 109936 Query 65483 TCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACC 65542 || | ||| || |||| || || || ||||| || || || || ||||| || || | | Sbjct 109937 TCGATGGACTCGTTGTTACCCAGGATCTGGGCGGTGGAGGCTGTGGGCATCGGGGCCAGC 109996 Query 65543 AACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC 65602 | || ||| | || ||||| | | || || | || | ||||| |||| Sbjct 109997 AGCAGGCTGTTCCTCACGCCGTTTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCAC 110056 Query 65603 ATCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCC 65662 | ||| ||| || | || | ||||| || | |||||| | || | ||| | Sbjct 110057 A--GGTCGGTCGGCGTCTTCTCC----CACATGTCGTACTGCAGGATGCCCTTGCTGACT 110110 Query 65663 GGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCG 65722 || || || | | | ||||| || ||| || || | ||||| | ||| Sbjct 110111 GGGGAGCCCTCGTACGTCTCGTAGGGGCCGAACTCGGCTGCCAGCTCGCAGCTCGCCTCC 110170 Query 65723 AGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTC 65782 || || || | || ||||||||||| ||| | || || | ||||| ||| Sbjct 110171 AGAGCAGCGTAGTAGATGGTCTCGAAGATGTGGATGTTGAGCAGCTGAGCCTCGGGGCTT 110230 Query 65783 TCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATG 65842 || |||| || ||| |||| || | ||| || | |||||| ||||| || ||||| Sbjct 110231 TCAAACGGGTGACGCATGAGGATGAAGGCGTCTGCTAAACCTTGCACTCCGATTCCGATC 110290 Query 65843 GGACGATGACGCAAATTGGAACGTCTC-GCCTCAGGTACAGGGTAGTAATTGATATCGAT 65901 || | || ||| |||||| |||| || ||||| || |||||||| ||||| ||||| Sbjct 110291 GGCCTGTGGCGCTTGTTGGAAT-TCTCAGCTTCAGGCACTGGGTAGTAGTTGATGTCGAT 110349 Query 65902 AATGCGATTCAAATTGCGTGTC-ACCACATGCACGA--TACGTCGCAATTGTTCGAAATC 65958 ||| |||| || || | | || | || |||| | | || || || || Sbjct 110350 AATCTTGTTCAGGTTTT-TGACGATTACTTTGGTGACATACGCC--AGTTTTTTAAAGTC 110406 Query 65959 AAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGC 66018 |||| | || || || ||| || ||| ||| ||||| | || || Sbjct 110407 AAAA------GTCCGCTCCGGGGTGACGTACATG------TTG---AGGGCGATGGAGGC 110451 Query 66019 GAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATT 66078 || || ||||| |||| ||||||| | ||| || ||||| ||||| ||||| || || Sbjct 110452 CAGATTACAGACCGCTACCTCGTCATGGCTGGTGTATTCGACGATTTCTGTGCAGAGGTT 110511 Query 66079 ACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTA 66138 ||||| |||||||||| |||||| || || ||||| | ||||| || || ||||| Sbjct 110512 GCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTGTA 110571 Query 66139 CATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCG 66198 || ||||||||| || || ||||| || ||||| |||||||||| ||| || | Sbjct 110572 CAGCATGTACGGCGTACCCGTCTCCGTCTGCGACTCGATGATGGCGTACCACAGCTGCTG 110631 Query 66199 TGCCTTCACCGTACGTACCGCCCTACCTTTGCGTTCGTAA-TGTTCGTAGAGGTGTTCGA 66257 ||||||||| ||| ||||| |||| || || || | |||||| | || | Sbjct 110632 AGCCTTCACCACACGCTTGGCCCTCCCTTCCTTCTCATACCTGGT-GTAGAGCTCCTCAA 110690 Query 66258 AGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAAT 66317 | || ||||| ||| ||| | ||||| || ||||||||||| ||||| | Sbjct 110691 ACTCCTCCCCCCAGCACTCGTCCAGTCCAGGACAGGCGTTGGGACACATCAGAGACCAGT 110750 Query 66318 CACCATCCTGTTCTACACGACG--CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAG 66375 | | || ||| ||| ||| || ||||| || ||||| ||||||||||| || Sbjct 110751 CCTGGT--TGCTCTCCACCCTCTTCATGAACAGATCGGGGATCCAAAGGGCGTAGAAAAG 110808 Query 66376 ATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGA 66434 || | || | |||||||| | || ||| || || || |||||||| || || | Sbjct 110809 GTCTCTGGCCCTCTGCTCCTCCTTTCCTGTG-TTCTTCTTCAGCTCGAGGAAGTCGAACA 110867 Query 66435 TGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTT 66494 ||| ||||| || |||| ||| |||||||| | || | ||| |||||| | Sbjct 110868 CGTCAAAGTGCCACGGCTCCAAGTACATGGCGAAGGCTCCGGGTCTCTTGTTGCCACCCT 110927 Query 66495 GGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATT 66554 |||||||||| || || |||||| | || | || ||| || ||||||||||| || | Sbjct 110928 GGTCGACGTAACGCGCCGTGTTGTTGTAAACTCTCAGCATGGGGACGAGCCCGTTGGAGT 110987 Query 66555 TGCCATTGGTGCC 66567 |||||||||| || Sbjct 110988 TGCCATTGGTACC 111000 >seq1980 Length=102293 Score = 98.7 bits (108), Expect = 8e-16 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||| ||||| || || || ||||||||||| ||| | |||||||||| ||| || || Sbjct 5471 GGTGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGATTTTGCTG 5530 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| | ||||| || ||||| || | |||||| || || ||||| || || Sbjct 5531 GTTGCTCTTCCTGTTGCAGGCGTCCTTATAGAGCATGTATGGTGTCCCGGTTTCTGTCTG 5590 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACC 66225 ||||| |||| ||||| ||| || | ||||||||| |||| ||||| || Sbjct 5591 TGACTCGATGACGGCGTACCACAGCTGCTGAGCCTTCACCACACGTCTTGCCCTGCC 5647 >seq1579 Length=169011 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || ||||||||||| ||||| | ||||||||| |||| | || || |||| |||||| Sbjct 242 GATAATCCTCGTCGCTTCGTCATCTTCCCCATCCAGTACCACGACATCTGGCAGATGTAC 183 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || ||||| || || || |||||||||| |||||||| Sbjct 182 AAGAAGGCCGAGGCCTCGTTCTGGACGGCAGAGGAGGT 145 >seq35 Length=1322159 Score = 86.0 bits (94), Expect = 5e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||| ||||| | | || || |||| |||||| |||||||||| ||| |||| | Sbjct 416277 CAGGAAGTGCAGATCCCTGAAGCACGTTCCTTCTACAGCTTCCAGATCCTCATAGAGACT 416218 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | |||||| | || |||||||| || Sbjct 416217 GTTCACTCCGAGATGTACAGTATGCTCATCAACACTTACATCAGAGA 416171 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397539809695520