Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq25878 161 3e-37 seq185 132 2e-28 >seq25878 Length=4585 Score = 161 bits (178), Expect = 3e-37 Identities = 115/135 (85%), Gaps = 14/135 (10%) Strand=Plus/Minus Query 290 AGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTT 349 |||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 1844 AGCTCAACAGGGTCTTCT--------------CTCCAAGCCCGTTCCCTTGGCTGTGGTT 1799 Query 350 TCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAA 409 ||||| ||| |||| |||||||||||||||||| ||| |||||||||||||||||||||| Sbjct 1798 TCGCTGGATGGTAGGTAGGGACAGTGGGAATCTTGTTCATCCATTCATGCGCGTCACTAA 1739 Query 410 TTAGATGACGAGGCA 424 ||||||||||||||| Sbjct 1738 TTAGATGACGAGGCA 1724 >seq185 Length=83035 Score = 132 bits (146), Expect = 2e-28 Identities = 102/119 (86%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 ||| | |||||||||||| |||||||| ||| ||||||||| || ||||||| | ||| Sbjct 18938 TGATGGGGCATTTGGCTAAATTAAGAGACTCACAGTTACTCCTGCTGTTTACC--CACTT 18995 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 18996 CATTGAATTCCTTCAGTTTGACATTCAGAGCAC-GGGCAGAAATCACATTGTGTCAACA 19053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634638603136