Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq29994 95.1 2e-17 seq853 91.5 2e-16 seq256 91.5 2e-16 >seq29994 Length=9598 Score = 95.1 bits (104), Expect = 2e-17 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| |||||||||||| | || | ||| ||||| | || | || |||| || || | Sbjct 7597 GTATGAGAGGAACCGCAGGTTT--GGATATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 7540 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct 7539 GGTGCGAAGCTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 7486 >seq853 Length=1564648 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | ||||| | || | || |||| || || | Sbjct 1084968 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 1084911 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||| ||||||| | |||||||| |||||||||||||||||||||||| Sbjct 1084910 GGTGCGAAGTTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 1084857 >seq256 Length=203954 Score = 91.5 bits (100), Expect = 2e-16 Identities = 90/114 (79%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||| || | ||||| | || | || |||| || || | Sbjct 53006 GTACGAGAGGAACCGCAGG-TTCGGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 52949 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||| ||||||| | |||||||| |||||||||||||||||||||||| Sbjct 52948 GGTGCGAAGTTACCATCCGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 52895 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818927541248