Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Takifugu_20flavidus_20[genbank_20GCA_5F000400755.1_202013-05-30] 34,332 sequences; 378,032,400 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq854 244 8e-60 seq681 116 3e-21 seq5956 114 1e-20 seq1534 114 1e-20 seq1034 89.7 4e-13 >seq854 Length=240782 Score = 244 bits (270), Expect = 8e-60 Identities = 401/568 (71%), Gaps = 14/568 (2%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGC-GGTATACTCGACAATTTCGGTGCA 66072 || || || || || || |||| |||||| | || ||| || || |||||||| ||||| Sbjct 75241 GAGGCCAGATTACAAACNGCTACCTCGTC-GCTGCTGGTGTATTCCACAATTTCTGTGCA 75299 Query 66073 CAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATC 66132 ||||| |||| |||||||||| |||||| || || ||||| | |||||| ||||| Sbjct 75300 TAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGCAGGCATC 75359 Query 66133 CTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAG 66192 ||||| | |||||| ||||||||||| ||| |||||||| |||||||| ||||||| Sbjct 75360 TTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCATGCCAAAC 75419 Query 66193 AGCGCGTGCCTTCACCGTACG---TAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGA 66248 | ||||||||| ||| || || ||| | || ||||| | ||||| Sbjct 75420 CTGCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTT----CTCGTATTTGGTGTAGA 75475 Query 66249 GGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCA 66308 | | || || || ||||| ||| ||| | ||||| | || ||||||||| | Sbjct 75476 GCTTCTCAAACTCCTCCCCCCAGCACTCGTTCAGCCCGGGACATTCGTCTGGACACATTA 75535 Query 66309 GCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGT 66368 | ||||| || | || || | ||| || | ||||| ||||| | |||| Sbjct 75536 GAGACCAGTCCTGGTTACTCTCCACCCTCTCCATGAACAAGTCAGGGATCCACATAGCGT 75595 Query 66369 AGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAAC 66427 |||| || || | |||| |||||||| | || ||| || || ||| || ||||| Sbjct 75596 AGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTG-TTCTTCTTCAACTCCAGGAAG 75654 Query 66428 TCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGT-TTGCC 66486 ||||| || |||| |||||| ||||||||||| |||||||| | |||| | | ||| Sbjct 75655 TCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAG-CCCCAGGCCTCTTGTT 75713 Query 66487 GCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCC 66546 ||||| ||||| || ||||| ||| |||||| | || | || ||| || || ||||| Sbjct 75714 TCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGACAAGCCC 75773 Query 66547 GTTAGATTTGCCATTGGTGCCGTCGATG 66574 || || |||||||||||||| ||||| Sbjct 75774 ATTGGAGTTGCCATTGGTGCCAGCGATG 75801 >seq681 Length=269650 Score = 116 bits (128), Expect = 3e-21 Identities = 121/159 (76%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 || ||||| ||||| || ||||||||||| ||| | |||||||||| ||||| || Sbjct 110556 GTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGG 110497 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| | ||||| || |||||||| | |||||| || |||||||| || ||| Sbjct 110496 TTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCTGTTTGA 110437 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 ||||| |||||||||| ||| || | ||||||||| Sbjct 110436 GACTCGATGATGGCGTACCACAGCTGCTGGGCCTTCACC 110398 >seq5956 Length=703 Score = 114 bits (126), Expect = 1e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| |||||| | ||||||||||| || ||||||| | |||||||| || ||||||| Sbjct 496 TGGAGCGTTTCACCCAGGAGGTGCAGGTCACGGAGGCCAGGTGTTTCTATGGGTTCCAGA 555 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | || || || || ||||||| || Sbjct 556 TCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTCCTGATTGACACCTACATCAAGG 615 Query 61376 A 61376 | Sbjct 616 A 616 >seq1534 Length=15379 Score = 114 bits (126), Expect = 1e-20 Identities = 98/121 (81%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| |||||| | ||||||||||| || ||||||| | |||||||| || ||||||| Sbjct 11024 TGGAGCGTTTCACCCAGGAGGTGCAGGTCACGGAGGCCAGGTGTTTCTATGGGTTCCAGA 10965 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||| ||||||||||| | || || || || ||||||| || Sbjct 10964 TCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTCCTGATTGACACCTACATCAAGG 10905 Query 61376 A 61376 | Sbjct 10904 A 10904 >seq1034 Length=215700 Score = 89.7 bits (98), Expect = 4e-13 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | || ||||| | |||||| ||| |||| | ||||||| | Sbjct 37915 CAGGAGGTGCAGGTTCCTGAAGCGCGCTCCTTCTACAGCTGCCAGGTCCTCATGGAGTCT 37856 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||||||||||||||| | |||||| | || ||||||||||| Sbjct 37855 GTGCACTCGGAGATGTACAGCCTGCTCATCAACACCTACATCAGGGA 37809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397401649100480