Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Takifugu_20rubripes_20[refseq_20GCF_5F000180615.1_202011-10-13]
6,835 sequences; 391,484,715 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq11 237 1e-57
seq15 116 3e-21
seq1226 114 1e-20
seq1106 114 1e-20
seq12 89.7 4e-13
>seq11
Length=11238946
Score = 237 bits (262), Expect = 1e-57
Identities = 588/875 (67%), Gaps = 37/875 (4%)
Strand=Plus/Plus
Query 65711 CAGCTGGTCTCGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGT 65770
||||| | |||||| || || | || ||||||||||| || | || || |
Sbjct 5178570 CAGCTCGCCTCGAGGGCTGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGAAGCTGA 5178629
Query 65771 GCCTCATCGCTCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACT 65830
|| || ||| ||| |||| || ||| |||| || | |||||||| ||| || ||
Sbjct 5178630 GCTTCGGGGCTTTCGAACGGGTAACGCATGAGGATGAATGCGTCGGCCAAACCCTGGACA 5178689
Query 65831 CCAATACCGATGGGACGATGACGCAAATTGGAACGTCTC-GCCTCAGGTACAGGGTAGTA 65889
|| || || || || | || ||| ||||| | |||| || || || || || |||||
Sbjct 5178690 CCGATTCCTATTGGCCTGTGGCGCTTGTTGGA-CTTCTCAGCTTCGGGCACTGGATAGTA 5178748
Query 65890 ATTGATATCGATAATGCGATTCAAATTGCGTGTCACCACATGCACGAT-ACGTC-GCAAT 65947
||| ||||| || || ||||| || | | || || | | | || | || |
Sbjct 5178749 ATTAATATCTATGATCTTGTTCAAGTT---TTTGACAACTACCTTGGTCACAGCAGCTAG 5178805
Query 65948 TGTTCGAAA-TCAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAG 66006
| || |||| |||||| | || || | ||| || ||| ||| ||
Sbjct 5178806 TTTTTGAAAGTCAAAA------GTCCGCTCAGCGGTGACGTACATG------TTG---AG 5178850
Query 66007 GGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGC-GGTATACTCGACAATTT 66065
|| | || || || || || || |||| |||||| | || ||| || || |||||||
Sbjct 5178851 TGCGACGGAGGCCAGATTACAAACCGCTACCTCGTC-GCTGCTGGTGTATTCCACAATTT 5178909
Query 66066 CGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGC 66125
| ||||| ||||| |||| |||||||||| |||||| || || ||||| | |||||
Sbjct 5178910 CTGTGCATAGATTGCTGCTCTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTATTGC 5178969
Query 66126 ATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGT 66185
| ||||| ||||| | |||||| ||||||||||| ||| |||||||| |||||||| |
Sbjct 5178970 AGGCATCTTTGTAGAGCATGTATGGAGTGCCGGTTTCAGTCTGGGACTCTATGATGGCAT 5179029
Query 66186 GCCAAAGAGCGCGTGCCTTCACCGTACG---TAC-CGCCCTACCTTTGCGTTCGTAATGT 66241
|||||| | ||||||||| ||| || || ||| | || ||||| |
Sbjct 5179030 GCCAAACCTGCTGGGCCTTCACCACACGCTTGACGCGGCCTTCTTT----CTCGTATTTG 5179085
Query 66242 TCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGA 66301
|||||| | || || || ||||| || ||| | ||||| | || ||||
Sbjct 5179086 GTGTAGAGCTTCTCAAACTCCTCCCCCCAGCACTCATTCAGCCCGGGACATTCGTCTGGA 5179145
Query 66302 CACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAG 66361
||||| || ||||| || | || || | ||| || | ||||| |||||
Sbjct 5179146 CACATTAGAGACCAGTCCTGGTTACTCTCCACCCTCTTCATGAACAAGTCAGGGATCCAC 5179205
Query 66362 AGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTC 66420
| ||||||| || || | |||| |||||||| | || ||| || || ||| ||
Sbjct 5179206 ATACCGTAGAAAAGGTCTCTGGCTCTCTGCTCCTCTTTTCCAGTG-TTCTTCTTCAACTC 5179264
Query 66421 GAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACG 66480
||||| ||||| || |||| |||||| ||||||||||| |||||||| | |||| |
Sbjct 5179265 CAGGAAGTCAAATATATCGGAATGCCAGGGTTCCAGGTACATGGCGAAAG-CCCCAGGCC 5179323
Query 66481 T-TTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTA 66539
| ||| ||||| ||||| || ||||| ||| |||||| | || | || ||| || |
Sbjct 5179324 TCTTGTTTCCACCCTGGTCCACATAGCGTGCGGTGTTGTTGTAAACTCTCAGCATGGGGA 5179383
Query 66540 CGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574
| ||||| || || |||||||||||||| |||||
Sbjct 5179384 CAAGCCCATTGGAGTTGCCATTGGTGCCAGCGATG 5179418
>seq15
Length=11516971
Score = 116 bits (128), Expect = 3e-21
Identities = 121/159 (76%), Gaps = 0/159 (0%)
Strand=Plus/Plus
Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109
|| ||||| ||||| || ||||||||||| ||| | |||||||||| ||||| ||
Sbjct 9312829 GTGTACTCTACAATCTCTGTGCACAGATTGCTGGATTTGATGGTGCCCAGGTTCTGCTGG 9312888
Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169
|| ||||| | ||||| || |||||||| | |||||| || |||||||| || |||
Sbjct 9312889 TTGCTCTTCCTGTTGCAGGCGTCCTTGTAGAGCATGTATGGTGTGCCGGTTTCTGTTTGA 9312948
Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
||||| |||||||||| ||| || | |||||||||
Sbjct 9312949 GACTCGATGATGGCGTACCACAGCTGCTGGGCCTTCACC 9312987
>seq1226
Length=411779
Score = 114 bits (126), Expect = 1e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| |||||| | ||||||||||| || ||||||| | |||||||| || |||||||
Sbjct 204112 TGGAGCGTTTCACCCAGGAGGTGCAGGTCACGGAGGCCAGGTGTTTCTATGGGTTCCAGA 204171
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375
| ||||||||||| ||||||| ||||||||||| | || || || || ||||||| ||
Sbjct 204172 TCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTCCTGATTGACACCTACATCAAGG 204231
Query 61376 A 61376
|
Sbjct 204232 A 204232
>seq1106
Length=3230
Score = 114 bits (126), Expect = 1e-20
Identities = 98/121 (81%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| |||||| | ||||||||||| || ||||||| | |||||||| || |||||||
Sbjct 3004 TGGAGCGTTTCACCCAGGAGGTGCAGGTCACGGAGGCCAGGTGTTTCTATGGGTTCCAGA 3063
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375
| ||||||||||| ||||||| ||||||||||| | || || || || ||||||| ||
Sbjct 3064 TCGCCATGGAGAACATCCACTCTGAGATGTACAGCCTCCTGATTGACACCTACATCAAGG 3123
Query 61376 A 61376
|
Sbjct 3124 A 3124
>seq12
Length=10661439
Score = 89.7 bits (98), Expect = 4e-13
Identities = 84/107 (79%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329
||||||||||| || | || ||||| | |||||| ||| |||| | ||||||| |
Sbjct 1963625 CAGGAGGTGCAGGTTCCTGAAGCGCGCTCCTTCTACAGCTGCCAGGTCCTCATGGAGTCT 1963684
Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376
|| ||||||||||||||||| | |||||| | || |||||||||||
Sbjct 1963685 GTGCACTCGGAGATGTACAGCCTGCTCATCAACACCTACATCAGGGA 1963731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397534881964400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |