Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14537 251 6e-62 seq7053 141 7e-29 seq3173 141 7e-29 >seq14537 Length=2063196 Score = 251 bits (278), Expect = 6e-62 Identities = 986/1522 (65%), Gaps = 65/1522 (4%) Strand=Plus/Plus Query 65423 TTGATGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGT 65482 |||| || |||||||| || ||||| || | || ||||||||| ||| || Sbjct 885731 TTGACGATCTGGAACTCCCCCGACAGCACCCTGCGCGTGTAGATGTTGCTGGTGTAGGCC 885790 Query 65483 TCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACC 65542 || | ||| || ||||||| || || ||||| || || || || |||||||| || | Sbjct 885791 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCGGTGGGCATGGGGGCCAGG 885850 Query 65543 AACAATGAGTTTCGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCAC 65602 | || ||| | || |||| | | || | | || | | ||||| |||| Sbjct 885851 AGCAGGCTGTTCCTCACGCCGTGCCGGGCGATCCTCTCCTTCAGCTGCTGCCAGTCCCAC 885910 Query 65603 A--TCGGTTTATCGTCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGG 65660 | ||||| | || | ||| | ||||| || | || ||| || | ||| Sbjct 885911 AGCTCGGTG----GGCGTCTTCCCC----CACATGTCGTACTGGAGGACGCCCTTGCTGA 885962 Query 65661 CCGGTGAACCGAGGAAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCT 65720 | || || || | | || ||||| ||| ||| ||| || || ||||||| || Sbjct 885963 CGGGGGAGCCCTCGTAGCTCTCGTAGGGGCCCAGCTCGGCGGCCAGCTGGCAGCTGGCCT 886022 Query 65721 CGAGTGCGGCAAAATAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGC 65780 | || || || | || ||||||||||| || | || || | ||||| || Sbjct 886023 CCAGGGCCGCGTAGTAGATGGTCTCGAAGATCTGGGTGTTCAGCAGCTGAGCCTCGGGGC 886082 Query 65781 TCTCGTACGGCATACCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840 ||||| |||| | ||| |||| || | ||| ||||| || || || || || |||| Sbjct 886083 TCTCGAACGGGTAGCGCATGAGGATGAAGGCGTCCGCCAGCCCCTGGACGCCGATCCCGA 886142 Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCG-CCTCAGGTACAGGGTAGTAATTGATATCG 65899 |||| || || ||| ||||| || |||| |||| || || |||||||| ||||| ||| Sbjct 886143 TGGGCCGGTGGCGCCTGTTGGAGCG-CTCGGCCTCGGGCACCGGGTAGTAGTTGATGTCG 886201 Query 65900 ATAATGCGATTCAAATTGCGTGTCACCACATGCACGATACGTCG--CAATTGTTCGAAAT 65957 || || |||| || | |||||| | | ||| || || | | ||| | Sbjct 886202 ATGATCTTGTTCAGGTTTCTGACCACCACCTTG--GTCACGGCGGCCAGCTTGTGGAAGT 886259 Query 65958 CAAAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATG 66017 | || || | || ||||| ||| || ||| ||| || || | || | Sbjct 886260 CGAAG-GT---GCAC--TCGGGGGTGACGTACATG------TTG---AGCGCGATGGAGG 886304 Query 66018 CGAGGTTGCAGACAGCTATCTCGTCAGGAGC-GGTATACTCGACAATTTCGGTGCACAGA 66076 | ||||||||||| || | |||||| | || ||| || || || || || |||||||| Sbjct 886305 CCAGGTTGCAGACGGCCACCTCGTC-GCTGCTGGTGTATTCCACGATCTCCGTGCACAGG 886363 Query 66077 TTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTG 66136 || |||| |||||||||| ||||| || || ||||| | ||||| || || ||| Sbjct 886364 TTGCTGCTTTTGATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTGTTGCAGGCGTCTTTG 886423 Query 66137 TACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCG 66196 || | ||||||||| |||||||| || |||||||| |||||||||||||| | Sbjct 886424 TAGAGCATGTACGGGGTGCCGGTTTCCGTCTGGGACTCGATGATGGCGTGCCACACCTGC 886483 Query 66197 CGTGCCTTCACCGTACG---TAC-CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTG 66252 | ||||||||| || || || || |||| ||| | | || |||||| | Sbjct 886484 TGGGCCTTCACCACGCGCTTGACGCGGCCCTCCTTCTCGTAGG--AGGT--GTAGAGCTT 886539 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312 || || || ||||| ||| || | || || | || ||||||||||| || Sbjct 886540 CTCAAACTCCTCCCCCCAGCACTCGTTCAAGCCGGGGCATTCGTCCGGACACATCAGAGA 886599 Query 66313 CCAATCACCATCCTGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 ||| | || || ||| || | ||| || | || || |||||||| |||||| Sbjct 886600 CCAGT--CCTGGTTGCTCTCCACCCTCTTCATGAACAAGTCGGGGATCCAGAGCGCGTAG 886657 Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAAT-GCCGTGATTTTTGCGCAAGTCGAGGAACTC 66429 || || || | |||| |||||||| | ||||| || || || || ||||| || Sbjct 886658 AACAGGTCCCTGGCTCTCTGCTCCTCCTTCCCCGTG-TTCTTCTTCAGCTCCAGGAAGTC 886716 Query 66430 AAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCC 66489 ||||| |||| ||||| || |||||||| |||||||| | ||| || ||| || Sbjct 886717 AAAGACGTCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGCCGCTTGTTCCC 886776 Query 66490 ACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTT 66549 || ||||| |||||||| || |||||| | || | || ||| || || || ||||| Sbjct 886777 TCCCTGGTCCACGTAGCGTGCCGTGTTGTTGTAAACTCTCAGCATGGGCACCAGGCCGTT 886836 Query 66550 AGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCA 66608 || | ||| ||||||||| |||| | ||| ||| || || || | || || Sbjct 886837 GGAGTGGCCGTTGGTGCCGGCGAT-GTAACTCCCCGTGGCTCGGATGCAGCTGACGGCCA 886895 Query 66609 GACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGC 66668 || || || ||||||| ||| |||||| || || | | || | | |||| Sbjct 886896 CGCCGATGCCCCCGGCCGACTTGGAGATGAGCGCGCACTGCTTGAGCGTGTCGTAAATGC 886955 Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCA--TGAACTAAGTTGGGGTTTGGG 66726 | || ||| ||| |||| |||| ||| ||| |||| || || || || || | Sbjct 886956 CCTCGATGCTGTCGTCCTTCATGGCCAGCAGGAAGCAGCTGGAC--AGCTGCGGCCGGTT 887013 Query 66727 TGTGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATT 66786 ||| | || |||||| ||||| | ||||| || || | | |||| || Sbjct 887014 GGTGCCTGCGTTGAAGAGCGTGGGCGAGGCGTGGGTGAACCACTTCTCCGACAGCAGGTT 887073 Query 66787 GTACGTCTCGATGACAGCATCAATGT--TTTCGCCATGAATCCCGAGTGCACATCGCATC 66844 ||| || |||||| | || || |||| ||| | || || |||| | | |||| Sbjct 887074 GTAGGTTTCGATGGCCGCGTCGATGTCGTTTTG--GTGGATGCCGACGGAGACCCTCATC 887131 Query 66845 AGGAGGTATTGAGGCCGTTCGACCA----GCCGATCCTTGATATGCATTAAGTAGGAGCG 66900 || | || || ||||| ||| ||| |||| ||||| | || | ||||||||| Sbjct 887132 AGCATGTGCTGCGGCCGCTCGGCCACTTTGCCG----TTGATCTTCAGCAGGTAGGAGCG 887187 Query 66901 TTCCAGGGTCTTGATACCAAAG 66922 ||||||||||||| || ||| Sbjct 887188 CTCCAGGGTCTTGAAGCCGAAG 887209 >seq7053 Length=111041 Score = 141 bits (156), Expect = 7e-29 Identities = 111/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| |||||| | ||||||||||| ||| ||||||| | ||||||||||| ||||||| Sbjct 46413 TGGAGCGTTTCACCCAGGAGGTGCAGGTGACGGAGGCCAGGTGTTTCTACGGTTTCCAGA 46472 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||||||||||||||| | || ||||| || ||||||| || Sbjct 46473 TCGCCATGGAGAACATCCACTCGGAGATGTACAGCCTCCTGATCGACACCTACATCAAGG 46532 Query 61376 AGCGGGCGGAACG 61388 ||| | |||| || Sbjct 46533 AGCCGTCGGAGCG 46545 Score = 141 bits (156), Expect = 7e-29 Identities = 111/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| |||||| | ||||||||||| ||| ||||||| | ||||||||||| ||||||| Sbjct 61126 TGGAGCGTTTCACCCAGGAGGTGCAGGTGACGGAGGCCAGGTGTTTCTACGGTTTCCAGA 61067 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||||||||||||||| | || ||||| || ||||||| || Sbjct 61066 TCGCCATGGAGAACATCCACTCGGAGATGTACAGCCTCCTGATCGACACCTACATCAAGG 61007 Query 61376 AGCGGGCGGAACG 61388 ||| | |||| || Sbjct 61006 AGCCGTCGGAGCG 60994 >seq3173 Length=1876 Score = 141 bits (156), Expect = 7e-29 Identities = 111/133 (83%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| |||||| | ||||||||||| ||| ||||||| | ||||||||||| ||||||| Sbjct 892 TGGAGCGTTTCACCCAGGAGGTGCAGGTGACGGAGGCCAGGTGTTTCTACGGTTTCCAGA 833 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | ||||||||||| ||||||||||||||||||| | || ||||| || ||||||| || Sbjct 832 TCGCCATGGAGAACATCCACTCGGAGATGTACAGCCTCCTGATCGACACCTACATCAAGG 773 Query 61376 AGCGGGCGGAACG 61388 ||| | |||| || Sbjct 772 AGCCGTCGGAGCG 760 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397443120536720