Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Tetraodon_20nigroviridis_20[genbank_20GCA_5F000180735.1_202004-05- 14] 25,773 sequences; 342,403,326 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq7151 105 3e-17 seq3189 105 3e-17 >seq7151 Length=34887 Score = 105 bits (116), Expect = 3e-17 Identities = 120/158 (76%), Gaps = 6/158 (4%) Strand=Plus/Minus Query 448988 TCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCG 449047 |||| || ||| || ||||||||| |||||| || | || ||||| | | ||||||| Sbjct 31996 TCGATCAGCATCCCGATGGTCATGCGGGACGGGAAGCCGTGGGGGTTGAACAGGATGTCG 31937 Query 449048 GGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT---G 449104 || | |||| | || |||||||||||||||| || | ||| ||||| | | | Sbjct 31936 GGGCACATGCCGCTCTCGGTGAAGGGCATGTCCTC--GGCCGGCCA-CAGGCGGCTCAGG 31880 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 | |||||||||||||||||||||| |||||||||||| Sbjct 31879 ATGCCCTTCTGGCCGTGGCGGCTGGCGAACTTGTCCCC 31842 >seq3189 Length=1874 Score = 105 bits (116), Expect = 3e-17 Identities = 120/158 (76%), Gaps = 6/158 (4%) Strand=Plus/Plus Query 448988 TCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTCG 449047 |||| || ||| || ||||||||| |||||| || | || ||||| | | ||||||| Sbjct 1177 TCGATCAGCATCCCGATGGTCATGCGGGACGGGAAGCCGTGGGGGTTGAACAGGATGTCG 1236 Query 449048 GGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT---G 449104 || | |||| | || |||||||||||||||| || | ||| ||||| | | | Sbjct 1237 GGGCACATGCCGCTCTCGGTGAAGGGCATGTCCTC--GGCCGGCCA-CAGGCGGCTCAGG 1293 Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 | |||||||||||||||||||||| |||||||||||| Sbjct 1294 ATGCCCTTCTGGCCGTGGCGGCTGGCGAACTTGTCCCC 1331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084033993967854