Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq115734 122 5e-26 seq22003 95.1 7e-18 >seq115734 Length=4856 Score = 122 bits (134), Expect = 5e-26 Identities = 100/120 (83%), Gaps = 5/120 (4%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAG---TCAAAATGATAACATCG 57 ||||||||||||||||||||||||||||||||||| | | ||||||| | | | | Sbjct 2086 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAACAACACATCAAAAT--TGAGGTTG 2029 Query 58 CCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||| ||||| ||||| |||||| | ||||||||| ||||||||||||||| ||||| Sbjct 2028 TCCGATCGCTAGTTGGCATCGTTTACTGGTAAGACTACAACGGTATCTGATCGTTTTCGA 1969 >seq22003 Length=21403 Score = 95.1 bits (104), Expect = 7e-18 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| | | | |||| ||| ||| |||||| |||| Sbjct 3939 GAACCCAAAGACTTTGGTTTCCTGGATGCTGCCTGGCGGTTCATGGGAATAACACCGCCG 3998 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||| ||||| ||||| ||| ||||||| ||||||||||||||||||| Sbjct 3999 GATCGCTAGTTGGCATTGTTTATGGTCGGAACTACGATGGTATCTGATCGTCTTCGA 4055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278052708180