Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq115734 91.5 9e-17 seq95123 73.4 2e-11 >seq115734 Length=4856 Score = 91.5 bits (100), Expect = 9e-17 Identities = 91/112 (81%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 13 CCGTTCGCCGGGTCCACAAAGCCAATTCCGAAAGTTCTCACTAAGCCATTTCATTCGGTA 72 ||||| ||||| | | | || ||||| | || | |||||||| |||| || |||||| Sbjct 2687 CCGTT-GCCGGCTGCCCGAAACCAATCCGGAGAC--CTCACTAAACCATC-CAATCGGTA 2632 Query 73 GTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGCAAGCT 124 ||| ||||||||||| ||||||||||||||||||| |||| |||||| |||| Sbjct 2631 GTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACTTAAT-CAACGCGAGCT 2582 >seq95123 Length=1308 Score = 73.4 bits (80), Expect = 2e-11 Identities = 61/71 (86%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 54 TAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATA 113 ||| |||| || ||||||||| ||||||||||| ||| ||||||||||||||| |||| Sbjct 1143 TAAACCATC-CAATCGGTAGTA-GCGACGGGCGGCGTGCACAAAGGGCAGGGACTTAAT- 1199 Query 114 CAACGCAAGCT 124 |||||| |||| Sbjct 1200 CAACGCGAGCT 1210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300424765160