Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq115732 773 0.0 seq84552 284 4e-74 seq124048 131 5e-28 seq121112 131 5e-28 seq131892 116 1e-23 seq35423 113 1e-22 seq92023 91.5 5e-16 >seq115732 Length=2673 Score = 773 bits (856), Expect = 0.0 Identities = 496/538 (92%), Gaps = 5/538 (1%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1941 CTTTTGTTCTACTTGAGATTTCTGTTCTCAATGAGTCCCCCTTAGGACACCTGCGTTATC 2000 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2001 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 2060 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 |||| | || |||||| | |||| ||| ||| || || |||| ||||| ||||||| Sbjct 2061 GGCCTGTAAAAGACCTTGAAGCCAAAAAGTGGGATGTTAATCCCAGCTCCGCCTCATTGA 2120 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||| ||||||| ||||||||||||||| |||||||| ||||||||||| Sbjct 2121 ATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCAAAGGCGCCGAA---GCTCCCACTTA 2177 Query 247 TTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 ||||||| ||||| | ||| |||||||| ||| |||||||||||||||||||||||||| Sbjct 2178 TTCTACACCCTCT-ATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 2236 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 2237 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGGT 2296 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2297 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 2356 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2357 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 2416 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2417 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 2474 >seq84552 Length=12394 Score = 284 bits (314), Expect = 4e-74 Identities = 168/175 (96%), Gaps = 0/175 (0%) Strand=Plus/Minus Query 289 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGT 348 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 3148 AAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGCGGT 3089 Query 349 TTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTA 408 ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 3088 TTCGCTAGATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTA 3029 Query 409 ATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTT 463 ||||||||| ||||||||||||||||||||||||||||||||||||||| || || Sbjct 3028 ATTAGATGAAGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCACCATT 2974 >seq124048 Length=588 Score = 131 bits (144), Expect = 5e-28 Identities = 105/123 (85%), Gaps = 4/123 (3%) Strand=Plus/Minus Query 392 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTT 451 ||||||||||||||||||||||||||||||||||||||||| || ||||||| || || Sbjct 588 ATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAACTAAAGAGAGATGTAATT 529 Query 452 -ACTCCCGCCGTTT-ACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG 509 | |||||||||| |||| ||||| | |||||||||||| |||||||||| || ||| Sbjct 528 GGCCCCCGCCGTTTAACCCACGCTTTATAGAATTTCTTCACATTGACATTCATAG--CTG 471 Query 510 GGC 512 ||| Sbjct 470 GGC 468 >seq121112 Length=2712 Score = 131 bits (144), Expect = 5e-28 Identities = 89/100 (89%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||| ||||||||||||||||| |||||||||| |||| ||||||||||||||||| Sbjct 911 CTTAATTGAGTCATAGTTACTCCCACCGTTTACCCATGCTTCTTTGAATTTCTTCACTTT 970 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 || ||||||||||||||||||||||||||| ||||||| Sbjct 971 GAAATTCAGAGCACTGGGCAGAAATCACATCATGTCAACA 1010 >seq131892 Length=793 Score = 116 bits (128), Expect = 1e-23 Identities = 73/78 (94%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 171 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTG 230 Query 495 ACATTCAGAGCACTGGGC 512 ||||||| || |||||| Sbjct 231 ACATTCATAG--CTGGGC 246 >seq35423 Length=6455 Score = 113 bits (124), Expect = 1e-22 Identities = 115/155 (74%), Gaps = 19/155 (12%) Strand=Plus/Plus Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 |||| | |||| |||||||||||||| | |||||||||||| | |||||||||||||| Sbjct 1263 ATAGAAAGTAGGTACAGTGGGAATCTCATCCATCCATTCATGCTCATCACTAATTAGATG 1322 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | |||||||||||| || ||| ||| ||| || ||| || Sbjct 1323 AAGAGGCATTTGGC-------------------TTGCTCTTGCCATTTCCCAGCGTTTCA 1363 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGG 511 |||||||||||||||||| ||||||||||||||| Sbjct 1364 CTGAATTTCTTCACTTTGAAATTCAGAGCACTGGG 1398 >seq92023 Length=12284 Score = 91.5 bits (100), Expect = 5e-16 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 6 TCTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 |||| ||||| || | || ||||||| ||| |||| | ||||||||||||||||||| Sbjct 10225 TCTTCTGCTCCACGGAAGGTTTCTGTCTTCCCTGAGCTCGCCTTAGGACACCTGCGTTAC 10284 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||| | | ||| |||||||| ||||||||||||||| Sbjct 10285 CGTTTGATAAGTGTACCGCCCCAATCAAACTCCCCACCTG 10324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1633024170176