Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq115734 704 0.0 >seq115734 Length=4856 Score = 704 bits (780), Expect = 0.0 Identities = 464/508 (91%), Gaps = 4/508 (1%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||| | ||| |||||| ||||||| |||||||||||||||||| Sbjct 1498 GTACTCATTCCAATTACAGGGCCCGAAAGAGTCCTGTATTGTTATTTATTGTCACTACCT 1439 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1438 CCCCGAGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 1379 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct 1378 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGAAACCATGGTA 1319 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||| ||| |||||| |||||||| | Sbjct 1318 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGACATTCGAATGATGCATCGCCGCCA 1259 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACC-AAGGAGCCCCGAAGGGCGTTGG 299 ||||||||||||||||| |||||||||||||||||| || |||| ||| ||||||| Sbjct 1258 CAAGGCCATGCGATTCGAGAAGTTATTATGAATCACCAAACGAGCGGCGAGCCGCGTTGG 1199 Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTA-GCATGTATTAGCTC 357 ||||||||||||||||||||||||| || |||||||||| ||| | |||||||||||||| Sbjct 1198 TTTTTTATCTAATAAATACACCCCTCCCAGAAGTCGGGGCTTTAATGCATGTATTAGCTC 1139 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 ||||||| |||| |||||||| |||| |||||| ||||||||||| ||||||||||||| Sbjct 1138 TAGAATTGCCACAGTTATCCAAGTAGCAAGGTAGCATCAAATAAACCATAACTGATTTAA 1079 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAATC 476 |||||||||||||||||||||||| | | ||| |||||||||||| |||||||||||||| Sbjct 1078 TGAGCCATTCGCAGTTTCACTGTACAAATTTGTTTATACTTAGACTTGCATGGCTTAATC 1019 Query 477 TTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||| Sbjct 1018 TTTGAGACAAGCATATGACTACTGGCAG 991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1508390231552