Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Thunnus_20orientalis_20[genbank_20GCA_5F000418415.1_202013-06-27] 133,062 sequences; 684,497,465 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq47227 86.0 3e-11 >seq47227 Length=15209 Score = 86.0 bits (94), Expect = 3e-11 Identities = 116/159 (73%), Gaps = 6/159 (4%) Strand=Plus/Plus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||| | |||||| | ||||||||| || ||| || | || ||||| | | |||||| Sbjct 9074 CTCAATCAACATCCCAATGGTCATGCGGGAGGGGAAGCCGTGGGGGTTGAACAGGATGTC 9133 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103 || ||| |||| | | |||||||||||||||| | || ||| ||||| | | Sbjct 9134 TGGAGTCATGCCGCTCTCTGTGAAGGGCATGTCCTC--TGCTGGCCA-CAGGCGGCTCAG 9190 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 || ||||||||||||||||||||| |||||||| || Sbjct 9191 GATACCCTTCTGGCCGTGGCGGCTGGCAAACTTGTCACC 9229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2081098330677476