Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20couchianus_20[genbank_20GCA_5F001444195.1_202015-11- 17] 25 sequences; 708,396,389 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq15 98.7 4e-15 >seq15 Length=28402361 Score = 98.7 bits (108), Expect = 4e-15 Identities = 119/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| || ||| || ||||||||| || ||| || | |||||||| | || |||||| Sbjct 3401752 CTCGATCAGCATCCCGATGGTCATGCGAGATGGGAAGCCGTGCGGGTTGAAGAGGATGTC 3401693 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103 || || |||| | || |||| ||||||||||| || | ||| ||||| | | Sbjct 3401692 CGGGCTCATGCCGCTCTCGGTGAACGGCATGTCCTC--GGCCGGCCA-CAGGCGGCTCAG 3401636 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 || ||||||||| |||||||||||| ||||||||| || Sbjct 3401635 GATGCCCTTCTGACCGTGGCGGCTGGCGAACTTGTCGCC 3401597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738515944950