Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq18 96.9 4e-18 >seq18 Length=80077792 Score = 96.9 bits (106), Expect = 4e-18 Identities = 82/101 (81%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| || ||| |||||| ||||||||||| | | ||||| | ||||| Sbjct 59564021 CGGAAACCGACACAGGTGGTCTGGTTGAGGATACTAAGGCGTTCGGGTGAACTATGGTTA 59563962 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||||| |||||| || ||| |||||||||||| || ||| Sbjct 59563961 AGGAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 59563921 Score = 87.8 bits (96), Expect = 2e-15 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 || |||| |||||| || ||| ||| || ||||||||||| | | ||||| ||||| Sbjct 60305099 CGGAAACCGACACAGGTGGTCAGGTAGAGAATACTAAGGCGTTCGGGTGAACTGTGGTTA 60305040 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGG 122 ||||||| |||||| || ||| |||||||||||| || ||| Sbjct 60305039 AGGAACTCGGCAAAATGCCCCCGTAACTTCGGGAGAAGGGG 60304999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531199871350