Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq18 87.8 2e-15 >seq18 Length=80077792 Score = 87.8 bits (96), Expect = 2e-15 Identities = 72/87 (83%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA--AAGTGGACGTATAGGGTGT 125 ||||||||||||||||||||||| | ||| || ||| |||| || ||||| || | Sbjct 60304939 GCGACTGTTTATTAAAAACACAGGTCCGTGCGAAAACGTGGAAGTTGAGGTATACGGACT 60304880 Query 126 GACGCCTGCCCGGTGCCGGAAGGTTAA 152 |||||||||||||||| |||||||||| Sbjct 60304879 GACGCCTGCCCGGTGCTGGAAGGTTAA 60304853 Score = 86.0 bits (94), Expect = 6e-15 Identities = 72/88 (82%), Gaps = 3/88 (3%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGA---AAGTGGACGTATAGGGTG 124 ||||||||||||||||||||||| | ||| || ||| |||| || ||||| || Sbjct 59563856 GCGACTGTTTATTAAAAACACAGGTCCGTGCGAAGACGTTGCAAGTCGAGGTATACGGAC 59563797 Query 125 TGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||||||||||||||||| |||||||||| Sbjct 59563796 TGACGCCTGCCCGGTGCTGGAAGGTTAA 59563769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476799884525