Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq18 132 1e-28 >seq18 Length=80077792 Score = 132 bits (146), Expect = 1e-28 Identities = 153/210 (73%), Gaps = 31/210 (15%) Strand=Plus/Plus Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG---CGACT 240 ||| |||||||||||||||||||||||||||||| | ||||| ||| |||| || || Sbjct 59563764 TCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCGACTTGCAACGTCT 59563823 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCC------ 294 | ||| |||||||||||| ||||||||||||| | |||||||||||| Sbjct 59563824 TCGCACGGACCTGTGTTTTTAATAAACAGTCGCTTCCCTCACTTCTCTGCGGCCACACAC 59563883 Query 295 -----------------TGTCATAG----ACA-GGCACCCCTTCTCCCTAAGTTACGGGG 332 || || | ||| ||| ||||||||||| ||||||||||| Sbjct 59563884 AACGCACACCGCACAAGGGTGATTGCCGCACATGGCCCCCCTTCTCCCGAAGTTACGGGG 59563943 Query 333 TCATTTTGCCGAGTTCCTTAACAATAGTTC 362 ||||||||||||||||||||| ||||||| Sbjct 59563944 GCATTTTGCCGAGTTCCTTAACCATAGTTC 59563973 Score = 122 bits (134), Expect = 2e-25 Identities = 153/212 (72%), Gaps = 25/212 (12%) Strand=Plus/Plus Query 176 CTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTT- 234 || || | ||| |||||||||||||||||||||||||||||| | ||||| || ||| Sbjct 60304840 CTCACGGGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCAACTTC 60304899 Query 235 -GCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC 293 || || ||| |||||||||||| ||||||||||||| || | ||||||| | Sbjct 60304900 CACGTTTTCGCACGGACCTGTGTTTTTAATAAACAGTCGCTTCCCTCTCTCCTCTGCGAC 60304959 Query 294 -----------------CTGTCA-----TAG-ACAGGCACCCCTTCTCCCTAAGTTACGG 330 |||||| ||| | || ||||||||||| ||||||||| Sbjct 60304960 CACCACCAGCCAATTCGCTGTCAGCAACTAGTAATGGTCCCCCTTCTCCCGAAGTTACGG 60305019 Query 331 GGTCATTTTGCCGAGTTCCTTAACAATAGTTC 362 || ||||||||||||||||||||| | ||||| Sbjct 60305020 GGGCATTTTGCCGAGTTCCTTAACCACAGTTC 60305051 Score = 96.9 bits (106), Expect = 7e-18 Identities = 79/96 (82%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTT 66 ||||||| || | | | ||||||||||| | |||| |||||||||| || ||||| Sbjct 59563533 GCATCTTTACTCGTACTGCAATTTCACCGGGCCTATGGTTGAGACAGCAGGGAAGTCGTT 59563592 Query 67 ACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGG 102 ||||| ||||||| |||||||||||||||||||||| Sbjct 59563593 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGG 59563628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062399734400