Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq18 208 3e-51 >seq18 Length=80077792 Score = 208 bits (230), Expect = 3e-51 Identities = 167/197 (85%), Gaps = 7/197 (4%) Strand=Plus/Plus Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCC---CGGCAT 57 ||||| |||||||||| |||||||||||||||| ||| |||| || || |||||| Sbjct 67486016 TCGACCACGGAGCTTA-TCCCCCGCAGTCTCACTGCCACGCTACAAC--CCGAACGGCAT 67486072 Query 58 TCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCCTAGACCATCCAGT-GCTCTACC 116 ||||||||||||||| || |||| | |||||| ||| | ||| ||||| |||||||| Sbjct 67486073 TCGGAGTTTGGTTGACGTCAGTAACCCTGTGGGGCCCATCAGCCACCCAGTAGCTCTACC 67486132 Query 117 TCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACG 176 |||| | |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 67486133 TCCGCCGGGCAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACG 67486192 Query 177 AAGTTTGATTGGCCTTT 193 |||||||||||||||| Sbjct 67486193 GAGTTTGATTGGCCTTT 67486209 Score = 174 bits (192), Expect = 6e-41 Identities = 157/192 (82%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 7 ACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCAC-TTCCCGGCATTCGGAGTT 65 |||||||||| |||||||| ||||||| ||| ||||| || || ||||||||||||| Sbjct 59564770 ACGGAGCTTA-TCCCCCGCCGTCTCACTGCCACGCTCGCATATTATTGGCATTCGGAGTT 59564828 Query 66 TGGTTGATTTCGGTAAGCTTGTGGGCCCCC-TAGACCATCCAGT-GCTCTACCTCCGGGA 123 | | || ||| |||| | | | ||| | | |||| ||||| |||||||| || | Sbjct 59564829 TAGCTGGCATCGCTAAGATGATCGTCCCGCATCAACCAACCAGTCGCTCTACCACCAACA 59564888 Query 124 AGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTG 183 | || ||||| |||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 59564889 ACAACCACGCAACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGGAGTTTG 59564948 Query 184 ATTGGCCTTTCA 195 |||||||||||| Sbjct 59564949 ATTGGCCTTTCA 59564960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817599545600