Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq18 181 2e-43 >seq18 Length=80077792 Score = 181 bits (200), Expect = 2e-43 Identities = 161/200 (81%), Gaps = 1/200 (1%) Strand=Plus/Plus Query 8 GGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGC 67 |||||| |||||||||| |||||| |||||||| || || |||| ||||| |||| Sbjct 73496822 GGCTTCCCGCTTAGATGCTTTCAGCGGTTATCCCTCCCGCACATAGCCAACCAGCCATGC 73496881 Query 68 ACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGA 127 ||| |||||||| ||| |||||| |||||||||||||||||||||||| ||| Sbjct 73496882 CACCGGCGTGACAACTGGCACACTAGAGGTACGTCCATCCCGGTCCTCTCGTACTAGGGA 73496941 Query 128 CAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTT 187 |||| |||| ||||| |||| | || ||||||| |||||||||||||| ||||||| Sbjct 73496942 CAGCCTTGTTCAAGTTTCC-ACGCGCGCGGCGGATAGAGACCGAACTGTCTCACGACGTT 73497000 Query 188 CTGAACCCAGCTCGCGTGCC 207 || ||||||||||||||||| Sbjct 73497001 CTAAACCCAGCTCGCGTGCC 73497020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780799810900