Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq18 111 3e-22 >seq18 Length=80077792 Score = 111 bits (122), Expect = 3e-22 Identities = 114/145 (79%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 98 AAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGC-TTCATGCGTTTTTTACCG 156 |||||||||||||| |||| | ||| || | ||| | || ||||||||||| ||||| Sbjct 63386055 AAGGAAGGCTTCTT-GTGGGACTTCTAC-TGATCCAATAGCCTTCATGCGTTTCTTACCA 63386112 Query 157 GCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGGCC 216 || ||||| || ||||| || ||||| ||||| |||||||| ||||| || ||||| Sbjct 63386113 GCTTTTTGTTTTTCAAGGAGTTTGCGTTTACGAGAAACGTCACCACCGTAACACTTGGCA 63386172 Query 217 AGTACGTTCTTTCTGAGAGCCTTGA 241 ||||||||||| | || ||||||| Sbjct 63386173 AGTACGTTCTTACGAAGGGCCTTGA 63386197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838399790400