Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq18 105 2e-20 >seq18 Length=80077792 Score = 105 bits (116), Expect = 2e-20 Identities = 239/343 (70%), Gaps = 20/343 (6%) Strand=Plus/Minus Query 145 TGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGCC 204 |||||||| || |||||| | ||||||||||||| |||||| |||||||| || Sbjct 59564960 TGAAAGGCCAATCAAACTCCGTGATAGCTGGTTCTCCCCGAAATGCATTTAGGTGCAGCG 59564901 Query 205 TCAAGTA-TCACCATCGGGGGTAGAGC-ACTGTTATGGCTA--GGGGGTCATTGCGACTT 260 | || | | || |||||||| |||| | ||| | | ||| | | | ||| Sbjct 59564900 TTGCGTGGTTGTTGTTGGTGGTAGAGCGACTGGT-TGGTTGATGCGGGACGAT-CATCTT 59564843 Query 261 ACCAAA-CCATTGC-AAACTCCGAATGCGCATCAGTTTT-ACCGCGGGAGTGAG--GGCA 315 | | | ||| || ||||||||||||| || | | | || || |||||| ||| Sbjct 59564842 AGCGATGCCA--GCTAAACTCCGAATGCCAATAATATGCGAGCGTGGCAGTGAGACGGC- 59564786 Query 316 TGGGTGCTAAGGTCCGTGCC--CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCG 373 ||| | |||| |||||| | ||||||| || | || || || | ||||||||| Sbjct 59564785 -GGGGGATAAGCTCCGTGACGTCGAGAGGGAAACAGCCCAGATCGTCGGTTAAGGCCCCT 59564727 Query 374 AAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTT 433 || | ||| ||| || || || || | || || |||||||| |||| |||||||| Sbjct 59564726 AAGGGTGTGCTGAGTGGAA--AAGGAGGTGTCATCGCGAAGACAGCCAGGAGGTTGGCTT 59564669 Query 434 GGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGT 476 |||||||||| || || ||||||||||||| |||||||| || Sbjct 59564668 AGAAGCAGCCA-TCCTTGAAAGAGTGCGTAATAGCTCACTGGT 59564627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689599577600