Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_011344.1 Length=47342 Score E Sequences producing significant alignments: (Bits) Value seq18 95.1 4e-15 >seq18 Length=80077792 Score = 95.1 bits (104), Expect = 4e-15 Identities = 119/157 (76%), Gaps = 5/157 (3%) Strand=Plus/Plus Query 19509 ACATCCAGCAAGTGCAGGACATGGATTAAACTTACAACAAGGTGGGCA-CATTATTGTTT 19567 ||| ||||| |||||||||||||| |||| |||||| | || || || |||| | || | Sbjct 57514879 ACACCCAGCTAGTGCAGGACATGGTCTAAATTTACAAAAGGGAGGTCATCATT-TAGTGT 57514937 Query 19568 GGTTTGGACTTACATGGTCCTTGGAATTATACCAACAAGCAAATGCTAGATTATACAGAC 19627 ||||||| | || ||||| | ||| | ||||||||| | ||||||||| | | | | Sbjct 57514938 GGTTTGGGTTAACTTGGTCTCTTGAACTTTACCAACAAACCAATGCTAGACTTTGGCGTC 57514997 Query 19628 AAGGACAA-AATCATAC-GACT-ATTATTCATCATAT 19661 |||| ||| ||||| || | | |||||||| ||||| Sbjct 57514998 AAGGGCAACAATCAAACACAGTCATTATTCAGCATAT 57515034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151372755061200