Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq7 104 1e-16 >seq7 Length=28447608 Score = 104 bits (114), Expect = 1e-16 Identities = 120/159 (75%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046 ||||| || ||| || ||||||||| |||||| || | |||||||| | || |||||| Sbjct 3413487 CTCGATCAGCATCCCGATGGTCATGCGAGACGGGAAGCCGTGCGGGTTGAAGAGGATGTC 3413428 Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCACCAGGCCGTT--- 449103 || || |||| | || |||| ||||||||||| || | ||| ||||| | | Sbjct 3413427 CGGGCTCATGCCGCTCTCGGTGAACGGCATGTCCTC--GGCCGGCCA-CAGGCGGCTCAG 3413371 Query 449104 GACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTCCCC 449142 || ||||||||| |||||||||||| ||||||||| || Sbjct 3413370 GATGCCCTTCTGACCGTGGCGGCTGGCGAACTTGTCGCC 3413332 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084738515944950