Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_031076.1 Length=38071 Score E Sequences producing significant alignments: (Bits) Value seq18 100 7e-17 >seq18 Length=80077792 Score = 100 bits (110), Expect = 7e-17 Identities = 156/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 34986 AATGGAAGGACGGCGAGGCCCTGTTCCTGCCCTGCTCGGTGTGGCGTCAGCCGGCCGAGA 35045 ||||| | ||||||||||| ||| ||| ||||| ||||||||||| | || || | Sbjct 63388452 AATGGGAAGACGGCGAGGCGATGTACCTTACCTGCAATGTGTGGCGTCAAGCAGCGGAAA 63388393 Query 35046 ACGTGGCCGAATCGCTGGCCAAGGGCATGCGTGTGATCGTCCAGGGACGTCTCCGGGCGC 35105 |||| || || || ||| | ||||||||||| || || || ||||| || || ||| || Sbjct 63388392 ACGTTGCTGAGTCCCTGTCAAAGGGCATGCGCGTCATTGTGCAGGGTCGACTGCGGCAGC 63388333 Query 35106 GCAGCTACGACGACCGCGACGGAAACCGTCGCACTGTGATCGGGATCGAAGTCGATGACG 35165 || |||||| ||| || || | || |||| | | | | || || ||||| | Sbjct 63388332 GCTCCTACGAATCCCGTGAGGGTGAGCGCCGCAGCATTTTTGAAGTTGAGGTTGATGAAG 63388273 Query 35166 TGGGCCCGGCGTTGAAGTTTGCCACCGCTACCGTCACCCGCGC 35208 | ||||| | ||| ||||| ||||| |||||||| || Sbjct 63388272 TTGGCCCTTCCCTGAGTTTTGCTACCGCACAAGTCACCCGGGC 63388230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 121705563868650