Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20hellerii_20[genbank_20GCA_5F001443345.1_202015-11-13] 25 sequences; 733,802,474 total letters Query= NC_031941.1 Length=34563 Score E Sequences producing significant alignments: (Bits) Value seq18 578 9e-161 >seq18 Length=80077792 Score = 578 bits (640), Expect = 9e-161 Identities = 696/940 (74%), Gaps = 16/940 (2%) Strand=Plus/Plus Query 1136 GGATAAGAGCCGTCTGAGTGTACGTACCAGTAGCCAGTGCCATTTTTCTGCCAGCCTGTT 1195 ||||||||||| ||||| | | |||| |||||||| |||||| |||| || | | Sbjct 30080955 GGATAAGAGCCATCTGACTCCTCCCACCACCAGCCAGTGGCATTTTGACGCCATCCAGCT 30081014 Query 1196 GCAGCGCTCAAGCCGTTTTCGATGTCTTGCTTAAACTGCTCACGGCTAATGCCCCAACTT 1255 ||| | || ||| || || | ||||||||||||||||| |||||||| || Sbjct 30081015 TCAGTAGAGATACCACCTTCAATATCATTTTTAAACTGCTCACGGCTGATGCCCCATTTT 30081074 Query 1256 GCAAGATATGGATAAGGGTCAACGTGGTCTGAGTGGTTGTTTGGTTGGTTATTGGTACAG 1315 |||||||| ||||| || ||||||||||| |||| ||| |||||||||| || || Sbjct 30081075 GCAAGATAAGGATACGGATCAACGTGGTCAGAGTAGTTTCGAGGTTGGTTATATGTGCAA 30081134 Query 1316 TATTCATGCGTCTTGATACCTGCCAAGTCGTCTGTATCAAGAGTCTTCGGCAAGCCTGCT 1375 |||| |||||||||||| ||||| | | ||| | || || || || || | |||||| Sbjct 30081135 TATTGATGCGTCTTGATTCCTGCTAGGCTGTCAGAGTCCAGCGTTTTAGGAATCCCTGCT 30081194 Query 1376 TCGTCCGCTAGATTGCGTAGCAATTCGATATAGAGGCGGTAGTCCGTCATGAACTCTTCT 1435 || || || || ||||| | | || | |||||| || || |||||||||||| Sbjct 30081195 TCATCAGCGAGGTTGCGCAAAAGCTCAACATAGAGCTTATAATCACGCATGAACTCTTCC 30081254 Query 1436 TTAGTTGAATGGCTTTCAATCAGTTCAACCGCTGCATAGGTCTCAGCATTCCAACCGCCC 1495 || || |||||| ||||||| |||||| | || ||| | |||||||| || Sbjct 30081255 TTGGTCTCATGGCTCTCAATCAATTCAACTTGACCGTATCCTTCAACGTTCCAACCACCG 30081314 Query 1496 CCAACATCCCAACTTCCGTTGT-----TCACAGGTCCTACTTGCATGACACGGCCGTTTC 1550 || ||||| || ||| ||| | ||||| |||||| ||||| || || | Sbjct 30081315 CCTACATCATAAGCTCCCATGTCTGTGTACCAGGT-----TTGCATCACACGACCATTCC 30081369 Query 1551 CGACAACATGTGAAAAGAACCCTAGTTCAG--GGTCCTTTCTATAGTGATAATCCGCTTC 1608 ||||||| || || || || ||| ||| |||| | | || ||| || |||||||| Sbjct 30081370 CGACAACGTGCGAGAAAAATCCTGAATCAACAGGTCGTCGC-AT-GTGGTAGTCCGCTTC 30081427 Query 1609 ATTCTGTACGGTTGAGTTGCGGTTACCTGTTGAGTGAGCATGTACTTGTCGATAAGGCTG 1668 ||| || ||||||| || | || ||||||||||| ||||| | ||||| || || || Sbjct 30081428 ATTTTGAGCGGTTGAATTTGGATTTCCTGTTGAGTGCGCATGAATTTGTCTGTATGGTTG 30081487 Query 1669 CACCCCAACCTGTGGCAAGCCTGTACGTAGTCTGTTTCTATCGATATCCATTCCCTATCG 1728 | |||||||| || | | | || | ||||||| || | || |||||||| || | Sbjct 30081488 TTCTCCAACCTGGGGAAGGTCAGTCCTTAGTCTGCTTGTGTCAATATCCATGAT-TACTG 30081546 Query 1729 TCCTTTCCATGCGTCATTCATCTGCTTCACTGCTGACTCTACGAAGGTGTCTAAGTTTTT 1788 ||||||||| || |||||||||||||| ||||||||||| || || || ||||||| || Sbjct 30081547 TCCTTTCCACGCATCATTCATCTGCTTAACTGCTGACTCGACAAATGTATCTAAGTCATT 30081606 Query 1789 GTCAGTCATGCTAATATTGTATTTTGTAAGCTCAGCACGGACTTTAGCACGAGCCTGTGC 1848 |||||||||||| ||||||||||| || ||||| ||||| | ||||| || || ||| | Sbjct 30081607 GTCAGTCATGCTGATATTGTATTTGGTTAGCTCGGCACGAATTTTAGTGCGTGCTTGTTC 30081666 Query 1849 CAGTTTTTCATCGCCTTTAAAGCCAGTCTCTGAGGCAACCTGCTCAACGGCATTTACTGC 1908 ||||| || |||||||| ||||||| || | || ||||||||||| ||||| ||||| Sbjct 30081667 AAGTTTCTCTTCGCCTTTGTAGCCAGTTTCGGCTGCGACCTGCTCAACAGCATTAACTGC 30081726 Query 1909 GTTCTTGGCCAAGATTTCAACAATCTTGATAGTCTTTTCTCCACCTTTTTTGACGAGGTA 1968 |||||| ||||||||||| || || ||||||||||||||||| ||||||||||| ||||| Sbjct 30081727 GTTCTTAGCCAAGATTTCGACGATTTTGATAGTCTTTTCTCCGCCTTTTTTGACAAGGTA 30081786 Query 1969 TTCCTTGGCTGCCCTAACTACCACCCCTGCCAAAACGACTAGGATGCTGATTGCTCCATT 2028 || ||| | ||| ||||| | | ||| || || ||||||||||| | |||||| || Sbjct 30081787 GTCTTTGACCGCCTTAACTGCGATACCTAGCATAATAACTAGGATGCTAACTGCTCCGTT 30081846 Query 2029 AGTAATGATTTCAGTAATTTGTTGCATTTGTTATTCTCCT 2068 | || |||||| | |||||||||| |||| ||||||| Sbjct 30081847 TGCGATAATTTCATTGATTTGTTGCA-TTGTCTTTCTCCT 30081885 Score = 374 bits (414), Expect = 2e-99 Identities = 246/276 (89%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 23716 TCGGAGAACTATATTTAGGTTCAGCAATACAAATATAATCTCCACTCTCTATTTTCGCTA 23775 |||||||||||| || ||||||| | || |||||||||||||| || |||||||| ||| Sbjct 30104377 TCGGAGAACTATTTTCAGGTTCATCTATGCAAATATAATCTCCGCTTTCTATTTTTCCTA 30104436 Query 23776 AGATTTCCAAATCATAACTCATCTACCTGATTCCTCCGCATTATACTGCAACCATACTAA 23835 ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 30104437 AGATTTCCAAATCATAACTCATCTACCTGCCTCCTCCGCAGCATACTGCAACCATACTAG 30104496 Query 23836 GCATTCATATAGATCCCTTGCTTGCCTTTTGATGTTGCTTAATGATAGACTGCTCAATTT 23895 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 30104497 GCATTCATATAGATCCCTTGCTTGCCTTTTGATGTTGCTTAATGATTGACTGCTCAATTT 30104556 Query 23896 ATCATCATTTTGTAAGACTTCTATCTTGAAATTTGAAATAGCAGCAGTCAATTCTTTTNN 23955 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 30104557 ATCATCATTTTGTAAGACTTCTATCTTGAGATTTGAAATAGCAGCAGTCAATTCTTTTTC 30104616 Query 23956 NNNNNNNNNNTTTTCACTACATGACATCACTCCACC 23991 |||||||||||| |||||||||||| Sbjct 30104617 TTTTTTTAAACTTTCACTACATGGCATCACTCCACC 30104652 Score = 293 bits (324), Expect = 5e-75 Identities = 458/659 (69%), Gaps = 0/659 (0%) Strand=Plus/Minus Query 8731 ATGGACCACTTGCCCATCAAGTTCATAAGCTTCAATCTTGATAGCATCAGAGACCTTGTC 8790 ||| || || |||||||| |||||||| ||||||||| | |||| ||| || | ||| || Sbjct 64164092 ATGTACAACCTGCCCATCGAGTTCATAGGCTTCAATCGTAATAGAATCCGATAACTTATC 64164033 Query 8791 AATTCCCTCATTTGAGAACTTAGACTGTGCCCACTTCTGCAACTCTTCAACAGTTTTAGC 8850 ||| || ||||| |||||||| || ||||| ||| ||||| || ||||| Sbjct 64164032 AATCCCTTCATTCTTGAACTTAGCCTCAGCCCATTTCCTTAACTCCTCCGTGCTTTTAAG 64163973 Query 8851 ATTGTTGTTCTCATACTCTTTTTCATTGATATAAGGGTATGAGTTGATAAGAGGACTATC 8910 | | || || ||||||||||||||||| ||||| || || | |||| ||||||||||| Sbjct 64163972 AGTATTATTTTCATACTCTTTTTCATTAATATATGGATAGAAAGTGATTAGAGGACTATC 64163913 Query 8911 AACAGTCACTCTGATAGTCGTTTCTTTTTCAGCACCTTCAGGTTTAAAAGTCGACTTTGC 8970 ||||| | | | || ||| |||||| || ||| || |||||||| || || ||||| Sbjct 64163912 GACAGTAATTTTAATCGTCTCTTCTTTATCTTTACCATCTGGTTTAAATGTTGATTTTGC 64163853 Query 8971 GTGAATTCTTGTGACAACATTCTGACTGTTTTTTGTGCGTTGGTAGTTCTTCAGANNNNN 9030 |||||| | || | | ||| | ||| || | | ||| ||| ||| Sbjct 64163852 GTGAATACGAGTAATGATTGATTGAGTTGATTTGGTTCTCTTGTAAGACTTTAGATTCTT 64163793 Query 9031 NNNNNNNGTAATAACAACACCACGATTCTCCCCACGACTCTTCTTGACAGTCATCGCAAA 9090 |||||||||||||| | ||| || || | | ||||||||| |||| || || Sbjct 64163792 ATGTGTTGTAATAACAACACCCCTATTTTCACCTCTATTCTTCTTGATTGTCAGAGCCAA 64163733 Query 9091 GTTATCACGAACCAGCTCGCCTTCCCATGTACCAACAATGCTGTGCTTACCGTCCAGCAA 9150 || ||||||| || ||| |||||||| || || | || || ||| |||| || Sbjct 64163732 ATTGTCACGAATCAACTCTCCTTCCCAAGTTCCTATGATAGAATGGGCACCATCCATTAA 64163673 Query 9151 TATAGAGTATAGGGTTTCTGTTTCAGTCGTATTGAAGGTCCTACGGTCCTGGATATCACT 9210 | ||| || || |||| | |||| |||||||| |||| || || |||||||| Sbjct 64163672 GACAGAATAGAGTGTTTTTACTTCATCTGTATTGAAAGTCCGTCGATCTGTAATATCACT 64163613 Query 9211 GTTGAATGAGAAGTCTCCAAGAGCCGTTTTGGTGTTTTGTACCATGCGAGAAAGAGCCAT 9270 | ||||| || || |||||| || || || ||||||||||| |||| | ||||| Sbjct 64163612 CATAAATGAAAAATCACCAAGATTAGTCTTAGTATTTTGTACCATTTGAGATAAGGCCAT 64163553 Query 9271 GCCACAACTCTGACTAGTCACACTTACTGGTGTGATAGAACGTTGCATCACATCGTCTGA 9330 |||||| | || || ||||| | |||| ||||| |||||||| | || || || Sbjct 64163552 ACCACAAGTGAGATTAACAACACTAATTGGTTCAATAGACCGTTGCATAATGTCATCGGA 64163493 Query 9331 AATGTGATAGGCTGTGATTTCCAGATGATCATTGTATTCAACAGGTTTCTTAATGCGAA 9389 ||| || ||||| | || |||| | ||||| | ||||| || || ||||| |||| Sbjct 64163492 AATATGGTAGGCGATTATATCCAAACTATCATCATTTTCAATTGGCTTTTTAATACGAA 64163434 Score = 201 bits (222), Expect = 2e-47 Identities = 512/767 (67%), Gaps = 18/767 (2%) Strand=Plus/Plus Query 9847 AATTGTGATTTTAGGAAAGGCAAGAGCAGAACCTTGAACGGTTAAAGTTC--CACTTCTT 9904 |||||| ||||| ||||| || | ||| | ||||||||| | |||| | || || | Sbjct 66471657 AATTGTAATTTTTGGAAAAGCTAAAGCCGTACCTTGAACTCT--AAGTACACCATTTGAT 66471714 Query 9905 GTCAATCTCTGTGTATC-AGTGACTTTGAAGTGTTTGGTAGGGTGACAAGTGAAGGTTGC 9963 ||||| | ||| |||| | ||| ||| || ||| ||||| |||||| | || || || Sbjct 66471715 GTCAAAGTTTGTCTATCTATTGA-TTTAAAAAATTTAGTAGGATGACAAATAAAAGTAGC 66471773 Query 9964 TTTGGTCATGTAAAGACCAGGTTGCACTTCTTCAAGGTCGCTCACATTGACCTTA-TAGC 10022 ||| ||| | || | |||| | ||| || | || | ||||| || || | Sbjct 66471774 TTTTGTCGTATATACACCATCTCTTTCTTGTTTCACCTCAGT-ACATTTTACTCGGTAAC 66471832 Query 10023 ACCAAAGACGAGTTGTTTTGACTCGCTCACTCTCTAGCCAGAACTTTTCACGGATAAACA 10082 |||| ||||| || ||||| | ||| |||||||| ||||| |||| || |||||| | Sbjct 66471833 ACCAGAGACGTGTGGTTTTCATTCGTTCACTCTCAAGCCAAAACTGCTCCTTGATAAATA 66471892 Query 10083 GACTCATAAATTGGTTCATCTGTTCTTCAGTAGGTTTGACCAAGTAAATCGTATAGGTTT 10142 ||| ||||||||| | | |||||||| | || || || | |||||||||||| | || Sbjct 66471893 GACCCATAAATTGATGGAGTTGTTCTTCTGAGGGCTTAACAATGTAAATCGTATATGATT 66471952 Query 10143 TCTTGACCAATTCCCTATG----TTTGTTCGTCTGAACGATTGCTCCACTGATACCACCA 10198 | | | || || | || |||||| | ||| || || ||||| || || | Sbjct 66471953 TTTCAATTAAATCACGGTGCCGATTTGTT--TGCGAAAGA--GCGCCACTCATTCCCTTA 66472008 Query 10199 TGCTCCAAAAGAGCTGTCTTGCTCTCTCCCAGAGCAATTGAAGGAGAATCATGGACAATG 10258 || || || | | ||||| |||||| | || || ||||| || || |||||||| Sbjct 66472009 TGTTCTAATAAACTCGTCTTACTCTCTGCTAGGATAACAGAAGGCGATTCGTGGACAATC 66472068 Query 10259 ACTTTAAACGGAAAAGACGATGTTCTCACACCGTCAATCACAAGCTCATTATGCTTTATC 10318 |||||||| |||||| || |||| | ||||| || || | ||| || || ||| Sbjct 66472069 ACTTTAAAAGGAAAACTAGAAGTTCCAATTCCGTCTATGACTAACTCGTTTCTTTTAATC 66472128 Query 10319 ATGTAAACCCTCCTCTCAATTGTGTCTTACGTTGCAATTCGTCAGCAATCCTCTGCGCTA 10378 || || |||||||||||||| | | |||| ||||| ||||| || | |||| Sbjct 66472129 ATATAGTGGCTCCTCTCAATTGTTTTTGACGTGCTAATTCTTCAGCGATTCGACTTGCTA 66472188 Query 10379 CCTCATCAGCAATCCGAATGATGTCAGCTTCTTCTCTGACGGTGTTACCTGTAATAGTAA 10438 | |||| || || || || | | ||||| | | || || ||||| | || Sbjct 66472189 CTTCATTTGCTATTTTTTCAATATCTACCTGTTCTCGTATAATATTTCCAGTAATCGAAA 66472248 Query 10439 TGTTGATTGTC-GGTGAAGTTCCACCCATAGTCTGAGCTATACCTCGACCGATAGCACCA 10497 |||| | |||| || || | |||| || || ||||||| ||||| || ||| Sbjct 66472249 TGTT-AATGTCTGGCATTCTTAAATCCATCGTTCTTGCAATACCTCTTCCGATTGCCCCA 66472307 Query 10498 AGTGTTTTGTCATTAAGCGGTAATACTGCTTCATTCCCAGCTTCGCCACCAACCATAAGG 10557 || || ||||| | || | ||| ||||| || || ||||| || || ||||| ||| Sbjct 66472308 AGAGTAGATTCATTTAAAGGGAGTACCGCTTCGTTTCCTGCTTCTCCTCCTACCATTAGG 66472367 Query 10558 CTATTGCCATTCATTCCAAAAATGGTCGGTTTCGTCATGATCCCGCC 10604 ||| || | |||| || || ||||| || | ||||| || Sbjct 66472368 GAATTCCCTATTGTTCCGAAGGCAGTTGGTTTTGTTAAAATCCCCCC 66472414 Score = 199 bits (220), Expect = 9e-47 Identities = 268/370 (72%), Gaps = 6/370 (2%) Strand=Plus/Minus Query 2109 CTTTTACAATCGGCTGAAAAAGAGTAACATTTCCTTTTAATTTGCGGTAATTTTCAATGA 2168 |||||| ||| || | |||||| || ||| ||||||| ||| | || || ||||| | Sbjct 50176735 CTTTTAAAATTGGTTTAAAAAGTAGAATATTCCCTTTTACTTTTTGATAGTTCTCAATTA 50176676 Query 2169 GAGATTGAAAAGTAAATGCGATGTACCCGAGATAGATTGAGTGCAAGAATACAAAACCTG 2228 | ||||| ||||||||| | | ||| |||| ||| || || | || || | ||| || | Sbjct 50176675 GCGATTGGAAAGTAAATACTAGGTATCCGATATAAATAGAATACAGAAACATAAACCCAG 50176616 Query 2229 TCTTTTCAGGCAACAAAACGGACGCCGGAATGAGGATCATCAGTAA---GAGAACCCCTG 2285 | ||||||||||||||||| ||| |||||| | || | |||||| | || |||| Sbjct 50176615 TTTTTTCAGGCAACAAAACAGACATCGGAATCA--AT-AACAGTAACATAAAAATCCCTA 50176559 Query 2286 AAATCTTACGAAATAGCCCATTGATGCCGATTTTGCTCTTGTACTCGATGTCAGGATTGA 2345 | | || |||| || |||||||| || ||| | ||||| ||||| | |||||||| | Sbjct 50176558 AGACTTTTCGAATTAATCCATTGATTCCAATTCTACTCTTATACTCAACATCAGGATTTA 50176499 Query 2346 TAATTGCCGCAATCGTCCCTGTCACAAAATCAATGATTTCCATTGAGACAATCAGTGCTA 2405 ||| ||||||| || |||| ||||||||| |||||||| |||||| | |||| Sbjct 50176498 CAATGGCCGCAAATGTTCCTGATGCAAAATCAACAATTTCCATGATGACAATTAACGCTA 50176439 Query 2406 GAGCGTACAAGACCAAACCATCTTCAGTCTGTACGACACTTCTTAGAAAATTGAAAAATT 2465 || ||||| | | |||||||| || | | || |||||| |||||| || |||| Sbjct 50176438 ACGCATACAAAATAAGCCCATCTTCTGTTTCGATGAGCTTTCTTAAAAAATTAAACAATT 50176379 Query 2466 CAATTTGCAT 2475 |||| | ||| Sbjct 50176378 CAATATCCAT 50176369 Score = 196 bits (216), Expect = 1e-45 Identities = 353/510 (69%), Gaps = 6/510 (1%) Strand=Plus/Minus Query 1213 TTCGATGTCTTGCTTAAACTGCTCACGGCTAATGCCCCAACTTGCAAGATATGGATAAGG 1272 ||| || |||| ||||||||| || | ||||||||||| ||||||| |||||||| || Sbjct 50177293 TTCAATATCTTTCTTAAACTGTTCTCTACTAATGCCCCATTTTGCAAGGTATGGATAGGG 50177234 Query 1273 GTCAACGTGGTCTGAGTGGTTGTTTGGTTGGTTATTGGTACAGTATTCATGCGTCTTGAT 1332 || || || || || ||||||||||| | ||||| ||| ||| || || || Sbjct 50177233 ATCTACATGATCACTTCCATTATTTGGTTGGTTGTAAGTACAAAATTGATGAGTTTTAAT 50177174 Query 1333 ACCTGCCAAGTCGTCT-GTATCAAGAGTCTTCGGCAAGCCTGCTTCGTCCGCTAGATTGC 1391 || | |||| | || | ||| ||||| || || | || || ||||| |||| | | Sbjct 50177173 CCCAG-CAAGACTACTAGAATCTAGAGTTTTAGGGATTCCAGCCTCGTCAGCTAACTCAC 50177115 Query 1392 GTAGCAATTCGATATAGAGGCGGTAGTCCGTCATGAACTCTTCTTTAGTTGAATGGCTTT 1451 ||| | | || ||| || || || || ||||||| |||||||||| | ||| |||| Sbjct 50177114 GTAATAGCTTGACATAAAGTCGATAATCTCTCATGAATTCTTCTTTAGATTCATGACTTT 50177055 Query 1452 CAATCAGTTCAACCGCTGCATAGGTCTCAGCATTCCAACCGCCCCCAACATCCCAACTTC 1511 | || |||||||| || || ||| ||||||| ||||| |||||||| || | Sbjct 50177054 CTATTAGTTCAACTTGAGCGTAACCTTCAACATTCCATCCGCCGCCAACATCATAAGCAC 50176995 Query 1512 CGTTGTTCACAGGTCCTACTTGCATGACACGGCCGTTTCCGACAACATGTGAAAAGAACC 1571 | || || | |||||||| ||| || || || || ||||| || || || | Sbjct 50176994 CTCGGTCTACTAACCAAGTTTGCATGATACGACCATTCCCTACCACATGGGAGAAAAATC 50176935 Query 1572 CTAGTTCA--GGGTCCTTTCTATAGTGATAATCCGCTTCATTCTGTACGGTTGAGTTGCG 1629 || ||| || | | ||| || ||||| |||||||| ||| | || ||||| | Sbjct 50176934 CTGACTCAACTGGACGACGC-ATA-TGGTAATCTGCTTCATTTTGTGCCGTAGAGTTAGG 50176877 Query 1630 GTTACCTGTTGAGTGAGCATGTACTTGTCGATAAGGCTGCACCCCAACCTGTGGCAAGCC 1689 || ||||||||||||||||| ||||||||||| || ||| | || | || || | Sbjct 50176876 ATTTCCTGTTGAGTGAGCATGAACTTGTCGATAGGGTTGCTCACCGATTTGAGGAAGATT 50176817 Query 1690 TGTACGTAGTCTGTTTCTATCGATATCCAT 1719 ||| |||| ||| || |||| | ||||| Sbjct 50176816 TGTTCGTAATCTACTTTTATCAACTTCCAT 50176787 Score = 183 bits (202), Expect = 7e-42 Identities = 281/396 (71%), Gaps = 15/396 (4%) Strand=Plus/Plus Query 24267 CATCACTCCACCTCCTCAATCTCAAACCCTTCACAATCAAACACCCAGCCGATTTTTGCA 24326 ||||||||||||||||||| |||| ||| ||||||||||||||| | | || || Sbjct 30104805 CATCACTCCACCTCCTCAACTTCAACTCCTGGGCAATCAAACACCCAGTCAAAGTTGGCT 30104864 Query 24327 TTTTCTAGTTCTTTACGGGTGTGGGAATATATAGCATC-GTCTAAACTAAAGCTTTTTG- 24384 | |||||||||||| || |||||| || || | ||| || ||| | | ||| | Sbjct 30104865 TGTTCTAGTTCTTTGCGTGTGTGGTAAGATTTTAAATCCGTATAATTT---GTTTTGTTA 30104921 Query 24385 ----TAAAG-AAGTACCTTTCCAAAAGTTCTCCATAAA--CCAACATATTTTCTTTAATA 24437 || | ||||| ||| | || | | || ||| | ||| |||| Sbjct 30104922 CTCATATACCAAGTATCTTCATTGATATTATGTTTTAATACCATCGAATTACACACAATA 30104981 Query 24438 TTCCCTTTAATCTTTACCAGATACCGCTTCTCTTTTTCGACCTCATAGCCGTCAAGCCAT 24497 ||||| | ||| |||| ||||||||||||||| |||||||| |||||||| ||||| Sbjct 30104982 ---CCTTTCACCTTCACCAAATACCGCTTCTCTTTCTCGACCTCGTAGCCGTCCAGCCAA 30105038 Query 24498 GCGCGAGCGAAGAGGTCTTGGTTGCTCGCCTTTTTAATCCATAATATAAGATCGAAACTT 24557 || |||||||| ||||||||||||| |||||| | |||| | ||||| || || Sbjct 30105039 GCACGAGCGAATGTTTCTTGGTTGCTCGTCTTTTTTAACCATGAAATAAGTTCATCGTTT 30105098 Query 24558 TGGTTGTTTTCTTTCATAAAGTTTGGAGTCATAGCAGTATATAGACTAGTTGTTAAATGT 24617 | || | ||||| ||| | |||| ||||||||||||||| | ||| |||| | Sbjct 30105099 TTATTCCACTGTTTCAAAAAATCTGGATTCATAGCAGTATATAATCCTATTGCCAAATTT 30105158 Query 24618 TCTTTACAAACCTCAATCCAATCCGCCACAAACTGC 24653 ||||| || | |||||||||||||||||| ||||| Sbjct 30105159 TCTTTGCATGCGTCAATCCAATCCGCCACACACTGC 30105194 Score = 163 bits (180), Expect = 6e-36 Identities = 120/140 (86%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 30151 TAAAAGCGCTCTGTCCCTTCTCTTTCTGACGATATGCCGTTTCAGAAATGCCAAGCTTTT 30210 |||||| || ||||| || |||||||| || ||||||||||||||||| || || |||| Sbjct 30111802 TAAAAGAACTTTGTCCTTTTTCTTTCTGTCGGTATGCCGTTTCAGAAATCCCGAGTTTTT 30111861 Query 30211 TAGCTAATTCTTTCTGTGTAATGCCTTTTTCTTTTCTTAGTTGATACAAATAAATTTGCA 30270 ||||| |||||||||| || ||||||||||||| ||||||||| | ||||||||||| Sbjct 30111862 GCGCTAACTCTTTCTGTGAGATACCTTTTTCTTTTCGTAGTTGATAAAGATAAATTTGCA 30111921 Query 30271 CGTTCCTACCTCCTTATTTT 30290 ||||||||||||||||| || Sbjct 30111922 CGTTCCTACCTCCTTATCTT 30111941 Score = 154 bits (170), Expect = 3e-33 Identities = 205/285 (72%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 10974 TTGCCATACAGTAGAGAATACTCCCTTGATAGTTTCCCAAGCGCCTGACCAATCACCAGT 11033 || |||||| || || | ||| |||| || |||||||| || || |||||||| || || Sbjct 59760886 TTCCCATACTGTTGAAATAACTGCCTTTATTGTTTCCCATGCACCAGACCAATCTCCTGT 59760945 Query 11034 AATGATCTGCATAACTGCTTGGATAATACCAAGGACAACATTGATTGCAGTCTCAACAAC 11093 || | |||||| | ||||| ||||| || | ||||| ||||||||| || ||||| || Sbjct 59760946 TATAACCTGCATGATTGCTTTAATAATGCCTAAGACAAGATTGATTGCCGTTTCAACTAC 59761005 Query 11094 GGTCTTGATGATTTCCCAAGCTGTTGTAATGACAAGTTGGATATTATCCCAACCAGCTTG 11153 |||||||||||||||||||| | || | |||| ||||| ||||| | || || Sbjct 59761006 TTGTTTGATGATTTCCCAAGCTGTGCTGATAATCAGTTTTATATTTTCCCATGCTGCCTG 59761065 Query 11154 AATGAGTGGACCTAAAATTTCCAGAATTGTGCTTATAACCGTATAGATAGCATTCCAGAC 11213 ||| || ||| |||| || || || |||| || || |||| |||||||| || Sbjct 59761066 AATATAGGGTTCTAGAATTGACATAACGGTAGTTATGACTGTTGAGATTGCATTCCAAAC 59761125 Query 11214 AGTCTCAGCACTTGCTCGAATAAGTTCCTGGTTCTCCGTCCACCA 11258 || ||| ||| |||| | || || ||||| |||||||| Sbjct 59761126 TGTGGTTGCAGCTGCAAGAATTAACTCTTGATTCTCAGTCCACCA 59761170 Score = 141 bits (156), Expect = 2e-29 Identities = 90/98 (92%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 23619 CATGCTCCATCTCCTCAATCAACCAATCAAGGTTCTTGCGTGCTTTCTTCAGGTCTTCCA 23678 |||| |||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 30101467 CATGTTCCATCTCCTCAATCAACCAATCAAGGTTCTTGCGTGCTTTCTTCAGGTCCTCAA 30101526 Query 23679 GACCGTTTTTCTTTTGAAACCGTAACATATACTTGATT 23716 |||| ||||||||||| || || | ||||||||||||| Sbjct 30101527 GACCATTTTTCTTTTGGAAACGAAGCATATACTTGATT 30101564 Score = 129 bits (142), Expect = 1e-25 Identities = 261/387 (67%), Gaps = 10/387 (3%) Strand=Plus/Minus Query 13349 GTGAAGATTTCTTCGCTAGCTGATTCTGATTCATCTGGTGCTTTTTTGTCGTCATGCTCG 13408 || ||||||||||| || |||| ||||| || ||||| | ||| |||| |||| | Sbjct 56744697 GTAAAGATTTCTTCACTTGCTGTTTCTGTTTGATCTGCTTTTTTCTTGTATTCATCCCTT 56744638 Query 13409 CATTCAGCATTTCCATCAATACAGGCCCAACTTCCTGAATCGGAAAGACTTCCATTTCCA 13468 || ||||| | ||| || | || | ||||| || | ||||| | ||||| |||| Sbjct 56744637 GGTTAAGCATGTTCATTAAGATAGTTGCTACTTCTTGGACTGGAAACTCCTCCATCTCCA 56744578 Query 13469 TGAAGAATTGTTCATAAGGCTTGATGTGAGGATTTGCAGATTTAGCAAAGGTCCAAAAAA 13528 | ||||||| || | || || || ||||| |||||||| ||||| |||||||| Sbjct 56744577 TAAAGAATTCTTTGAATGGTTTAATTCTTGGATTAGCAGATTTCGCAAATACCCAAAAAA 56744518 Query 13529 GACGGTTGAAAAATGTCATATCAAAATCTGACAGCATCGAAATGTCAAT---ATCAGTTG 13585 | || ||||| ||||||||||||| | ||| || || | ||||| | ||||| Sbjct 56744517 TTCTGTGAAAAAAAGTCATATCAAAATTGGTCAGGATAGATAGATCAATGTCACCAGTTT 56744458 Query 13586 C-AGTCAACTCTTTGTGAGTTTCCAGCTTGTTCAAT-TCNNNNNNNNNNNNNNNNNNTTT 13643 | ||| |||| | | || || |||||||| | | Sbjct 56744457 CGAGT-TTTTCTTCCTCATTT---AG-GTGTTCAATCTTATCGAGAATTGACTGCGTACT 56744403 Query 13644 CAACATTGAAAACAAATCTTGAAAATAATCTTTCCCAAATTGTTGCTTGTAGGCGATAGG 13703 || |||||||||||| ||||||||||||||||| ||||| |||| || || || || || Sbjct 56744402 CACCATTGAAAACAAGTCTTGAAAATAATCTTTACCAAACTGTTCTTTATAAGCAATCGG 56744343 Query 13704 AGTATAGCCATTGGTCCCCAACTCATA 13730 ||||| |||| || | || ||||| Sbjct 56744342 TGTATAAGCATTAGTAGCTAATTCATA 56744316 Score = 105 bits (116), Expect = 1e-18 Identities = 177/252 (70%), Gaps = 17/252 (7%) Strand=Plus/Plus Query 24871 TCCACCTCCTCTATATCAATTCCTTCACAATCAAACACCCAGCCGAAGTTTGCGTCTTCT 24930 ||||||||||| | |||| |||| ||||||||||||||| | ||||| || | |||| Sbjct 30104811 TCCACCTCCTCAACTTCAACTCCTGGGCAATCAAACACCCAGTCAAAGTTGGCTTGTTCT 30104870 Query 24931 AGTTCTTTACGGGTGTGGGAATATATAACATC-GTCTAAACTAAAGCTTTTTGTAAAGAA 24989 |||||||| || |||||| || || | | ||| || ||| | |||| || | Sbjct 30104871 AGTTCTTTGCGTGTGTGGTAAGATTTTAAATCCGTATAATTTG----TTTTGTTACTCAT 30104926 Query 24990 ATACC-----TTTTCAA--AAGTTCTCCATAAA--CCAACATATTTTCTTTAATATTCCC 25040 ||||| | |||| | || | | || ||| | ||| |||| || Sbjct 30104927 ATACCAAGTATCTTCATTGATATTATGTTTTAATACCATCGAATTACACACAATA---CC 30104983 Query 25041 TTTAATCTTAACAAAATACCGCTTCTCTTTTTCAACCTCGTAGCCGTCAAGCCAAGCAAG 25100 ||| | ||| || ||||||||||||||||| || |||||||||||||| ||||||||| | Sbjct 30104984 TTTCACCTTCACCAAATACCGCTTCTCTTTCTCGACCTCGTAGCCGTCCAGCCAAGCACG 30105043 Query 25101 ACAGAATTTTTC 25112 | |||| |||| Sbjct 30105044 AGCGAATGTTTC 30105055 Score = 96.9 bits (106), Expect = 8e-16 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 9416 GGCGCTTTTATCAACATATCTTCTTGGATGAGCTGATAAATACCAGAGTCGGAAATGGGA 9475 || || || || | |||||| |||| || | | ||| |||||||| |||| ||| ||| Sbjct 64163329 GGAGCCTTAATAAGCATATCCTCTTTTATTTGTTTATAGATACCAGAATCGGTAATTGGA 64163270 Query 9476 TATTTCACAGTTAAGGTGAAATCACTATTCATGATCTCTTTAACAATCGCCGAAGTCGCT 9535 || | | |||||||||||||| |||| | ||||| ||||| || || | | | Sbjct 64163269 TAGCGAATTGATAAGGTGAAATCACCGTTCAGAGTTTCTTTTACAATAGCAGAGCTAGTT 64163210 Query 9536 TCATGAAGTGGCTCCCCGTTCCATCGAACGGTTCTTACATCTTTATTAAGTAGATAAAGC 9595 |||||||| || || ||||| | ||||| ||||||||| | ||| | | | Sbjct 64163209 TCATGAAGAGGTAATCCATTCCACTTTTCAGTTCTGCTATCTTTATTCAAAAGAAATAAC 64163150 Query 9596 AATTATGCCCACCCCCAAACCGTTTC 9621 | ||| |||||||||||| |||||| Sbjct 64163149 ATTTAAGCCCACCCCCAATTCGTTTC 64163124 Score = 91.5 bits (100), Expect = 3e-14 Identities = 74/89 (83%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 31388 TCATGGTGTTTCCCTCCGGTTTGTTTTTGTTATTTCCTTAAGCTTGATTTAATTATATCA 31447 ||||| | |||| |||| |||||||||||||||||||||||||||||||||||||| || Sbjct 30114778 TCATGTTTTTTC--TCCGATTTGTTTTTGTTATTTCCTTAAGCTTGATTTAATTATAGCA 30114835 Query 31448 CCATTTTGGTGACCTGTCAACAATATTTT 31476 | ||| ||| ||||||| | | |||| Sbjct 30114836 CACGTTTCGTGGTCTGTCAATATTTTTTT 30114864 Score = 89.7 bits (98), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 3/73 (4%) Strand=Plus/Plus Query 3135 TTCATGCTATTGTTTTCTCCAttttttctattttttGATTTAATTCTTGAATAGCCTTGA 3194 |||||||| |||||||||| |||||||||||||| ||| | ||||||||||||||| | Sbjct 30083124 TTCATGCT---GTTTTCTCCAATTTTTCTATTTTTTTATTGAGTTCTTGAATAGCCTTTA 30083180 Query 3195 TTAAGTAAGGAAC 3207 |||||||||| || Sbjct 30083181 TTAAGTAAGGCAC 30083193 Score = 84.2 bits (92), Expect = 5e-12 Identities = 79/98 (81%), Gaps = 2/98 (2%) Strand=Plus/Plus Query 33095 AAAAAGCCCCACAATCTCCCTCGCCAAAGTTTGATTGTGAAGCTCAACCTGTATAAAAAT 33154 ||||| ||||||| || || |||||||| ||||| | ||| | | | || |||||| || Sbjct 30117585 AAAAATCCCCACACTCGCCTTCGCCAAAATTTGAGTATGAGGAT-ATCCAGTATAAGAAA 30117643 Query 33155 CAGCCATTAAAAAGGCCTCTTTTCTATACCCTATTTTA 33192 || |||||||||||| | ||||| ||||||| |||||| Sbjct 30117644 CAACCATTAAAAAGGTCGCTTTTTTATACCC-ATTTTA 30117680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110479967201250