Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq865 102 1e-19 seq118 84.2 3e-14 >seq865 Length=71166 Score = 102 bits (112), Expect = 1e-19 Identities = 75/85 (88%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||||||||||| |||| |||||||||| |||| ||| Sbjct 30528 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTTG-TGACCCGCGCTTACTGGGAA-TTC 30585 Query 61 CTCGTTGAAGACCAACAATTGCAAT 85 |||||||| | |||||||||||| Sbjct 30586 CTCGTTGATGGGAAACAATTGCAAT 30610 >seq118 Length=1541288 Score = 84.2 bits (92), Expect = 3e-14 Identities = 63/70 (90%), Gaps = 3/70 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||||||||||||| |||| |||||||||| |||| ||| Sbjct 37511 GTACAAAGGGCAGGGACTTAATCAACGCGAGCTTG-TGACCCGCGCTTACTGGGAA-TTC 37568 Query 61 CTCGTTGAAG 70 |||| ||||| Sbjct 37569 CTCG-TGAAG 37577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751849695880