Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq6660 89.7 2e-16 seq436 73.4 2e-11 seq6684 71.6 6e-11 >seq6660 Length=2398 Score = 89.7 bits (98), Expect = 2e-16 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||||||||| ||||||| ||| ||||||||||||||| Sbjct 1884 GGAAAAGAAACTAACAAGGATTCCCTCAGTAGCGGCGAGCGAAGAGGGAAGAGCCCAGC 1942 >seq436 Length=352927 Score = 73.4 bits (80), Expect = 2e-11 Identities = 60/74 (81%), Gaps = 7/74 (9%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||||||||| ||||| || ||| ||||||| | Sbjct 50495 GGAAAAGAAACTAACAAGGATTCCCTCAGTAGCGGCG-------AGCGAAAAGCCCAGTG 50443 Query 61 CCGAATCCCCGCCC 74 |||||| |||| || Sbjct 50442 CCGAATTCCCGTCC 50429 >seq6684 Length=2370 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||||||||||||||| ||||||||| |||| ||||||| ||| ||||| |||||||| Sbjct 1857 GGAAAAGAAACTAACAAGGATTCCCCTAGTAGCGGCGAGCGAAGAGGGATAAGCCCAGC 1915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230355434880