Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xiphophorus_20maculatus_20[refseq_20GCF_5F000241075.1_202012-01-06] 20,632 sequences; 729,664,433 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq865 100 5e-19 seq118 82.4 1e-13 >seq865 Length=71166 Score = 100 bits (110), Expect = 5e-19 Identities = 77/90 (86%), Gaps = 1/90 (1%) Strand=Plus/Minus Query 239 GATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAG 298 ||||| | ||||||||| || | | |||||||||||| || |||||||||| |||| || Sbjct 30617 GATAGGG-ATTGCAATTGTTTCCCATCAACGAGGAATTCCCAGTAAGCGCGGGTCACAAG 30559 Query 299 CACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||||||||||| |||||||||||||||| Sbjct 30558 CTCGCGTTGATTAAGTCCCTGCCCTTTGTA 30529 >seq118 Length=1541288 Score = 82.4 bits (90), Expect = 1e-13 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 262 CTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCC 321 ||||| |||||||| || |||||||||| |||| ||| ||||||||||| ||||||||| Sbjct 37577 CTTCA-CGAGGAATTCCCAGTAAGCGCGGGTCACAAGCTCGCGTTGATTAAGTCCCTGCC 37519 Query 322 CTTTGTA 328 ||||||| Sbjct 37518 CTTTGTA 37512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947004573696